The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"paz domain
".
FunFam 1: Protein argonaute-2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 48 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
123 |
E7EXY4 (/IPI)
K4I874 (/IPI)
O04379 (/IPI)
O04379 (/IPI)
Q27IR0 (/IPI)
Q27IR0 (/IPI)
Q32KD4 (/IPI)
Q32KD4 (/IPI)
Q7KY08 (/IPI)
Q7KY08 (/IPI)
(113 more) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
122 |
E7EXY4 (/IDA)
K4I874 (/IDA)
O04379 (/IDA)
O04379 (/IDA)
Q27IR0 (/IDA)
Q27IR0 (/IDA)
Q32KD4 (/IDA)
Q32KD4 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
(112 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
77 |
Q8CJF8 (/IDA)
Q8CJF9 (/IDA)
Q8CJG0 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(67 more) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
72 |
G5EES3 (/IDA)
O16720 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(62 more) |
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
72 |
G5EES3 (/IDA)
O16720 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(62 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
58 |
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
(48 more) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
Single-stranded RNA binding GO:0003727
Interacting selectively and non-covalently with single-stranded RNA.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
RNA polymerase II complex binding GO:0000993
Interacting selectively and non-covalently with RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.
|
39 |
Q9UKV8 (/IDA)
Q9UKV8 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
(29 more) |
Core promoter binding GO:0001047
Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for the basal transcription machinery. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
39 |
Q9UKV8 (/IMP)
Q9UKV8 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
(29 more) |
RNA polymerase II complex binding GO:0000993
Interacting selectively and non-covalently with RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.
|
38 |
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(28 more) |
Core promoter binding GO:0001047
Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for the basal transcription machinery. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
38 |
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(28 more) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
37 |
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(27 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
37 |
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(27 more) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
37 |
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
(27 more) |
Endoribonuclease activity, cleaving miRNA-paired mRNA GO:0090624
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.
|
21 |
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
(11 more) |
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
|
19 |
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
(9 more) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
8 | Q27IR0 (/IPI) Q27IR0 (/IPI) Q32KD4 (/IPI) Q32KD4 (/IPI) Q7KY08 (/IPI) Q7KY08 (/IPI) Q7KY08 (/IPI) Q7KY08 (/IPI) |
SiRNA binding GO:0035197
Interacting selectively and non-covalently with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.
|
7 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q851R2 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
6 | G5EES3 (/IPI) G5EGR6 (/IPI) O04379 (/IPI) O04379 (/IPI) O16720 (/IPI) Q86B39 (/IPI) |
Endoribonuclease activity, cleaving siRNA-paired mRNA GO:0070551
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an siRNA, yielding 5'-phosphomonoesters.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
|
5 | O04379 (/IDA) O04379 (/IDA) Q8CJG0 (/IDA) Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
|
4 | A3KPK0 (/ISS) Q5ZLG4 (/ISS) Q6T5B7 (/ISS) Q8CJF9 (/ISS) |
Endoribonuclease activity, cleaving siRNA-paired mRNA GO:0070551
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an siRNA, yielding 5'-phosphomonoesters.
|
4 | G5EGR6 (/IDA) O16720 (/IDA) Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Endoribonuclease activity, cleaving miRNA-paired mRNA GO:0090624
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.
|
4 | A3KPK0 (/ISS) Q5ZLG4 (/ISS) Q6T5B7 (/ISS) Q8CJF9 (/ISS) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
3 | O04379 (/IDA) O04379 (/IDA) Q8CJG0 (/IDA) |
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Nucleic acid binding GO:0003676
Interacting selectively and non-covalently with any nucleic acid.
|
2 | Q32KD4 (/IMP) Q32KD4 (/IMP) |
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
|
2 | Q9UKV8 (/NAS) Q9UKV8 (/NAS) |
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
|
2 | Q8CJF9 (/ISO) Q8CJG0 (/ISO) |
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
|
2 | Q9UKV8 (/TAS) Q9UKV8 (/TAS) |
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
2 | Q9UKV8 (/IPI) Q9UKV8 (/IPI) |
Endoribonuclease activity, producing 3'-phosphomonoesters GO:0016892
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.
|
2 | G5EES3 (/IDA) O16720 (/IDA) |
SiRNA binding GO:0035197
Interacting selectively and non-covalently with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
2 | Q9UKV8 (/TAS) Q9UKV8 (/TAS) |
Pre-miRNA binding GO:0070883
Interacting selectively and non-covalently with a precursor microRNA (pre-miRNA) transcript, a stem-loop-containing precursor of microRNA.
|
2 | E7EXY4 (/IDA) K4I874 (/IDA) |
Endoribonuclease activity, cleaving miRNA-paired mRNA GO:0090624
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Endoribonuclease activity, cleaving miRNA-paired mRNA GO:0090624
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.
|
2 | Q8CJF9 (/ISO) Q8CJG0 (/ISO) |
MRNA cap binding GO:0098808
Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.
|
2 | Q9UKV8 (/IPI) Q9UKV8 (/IPI) |
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
|
1 | Q8CJG0 (/ISO) |
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
|
1 | Q69VD5 (/ISS) |
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
1 | Q8CJG0 (/ISO) |
SiRNA binding GO:0035197
Interacting selectively and non-covalently with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.
|
1 | Q8CJG0 (/ISO) |
MiRNA binding GO:0035198
Interacting selectively and non-covalently with a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.
|
1 | Q8CJG0 (/IMP) |
Endoribonuclease activity, cleaving siRNA-paired mRNA GO:0070551
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an siRNA, yielding 5'-phosphomonoesters.
|
1 | Q8CJG0 (/ISO) |
MRNA cap binding GO:0098808
Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.
|
1 | Q8CJG0 (/ISO) |
There are 129 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Production of miRNAs involved in gene silencing by miRNA GO:0035196
Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.
|
81 |
E7EXY4 (/IMP)
G5EES3 (/IMP)
K4I874 (/IMP)
O16720 (/IMP)
Q27IR0 (/IMP)
Q27IR0 (/IMP)
Q32KD4 (/IMP)
Q32KD4 (/IMP)
Q7KY08 (/IMP)
Q7KY08 (/IMP)
(71 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
76 |
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
(66 more) |
Pre-miRNA processing GO:0031054
Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
|
73 |
E7EXY4 (/IDA)
K4I874 (/IDA)
Q8CJG0 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(63 more) |
Wnt signaling pathway, calcium modulating pathway GO:0007223
The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).
|
70 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(60 more) |
RNA secondary structure unwinding GO:0010501
The process in which a secondary structure of RNA are broken or 'melted'.
|
70 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(60 more) |
RNA secondary structure unwinding GO:0010501
The process in which a secondary structure of RNA are broken or 'melted'.
|
70 |
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
(60 more) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
70 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(60 more) |
Negative regulation of gene expression GO:0010629
Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
70 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(60 more) |
Posttranscriptional gene silencing by RNA GO:0035194
Any process of posttranscriptional gene inactivation (silencing) mediated by small RNA molecules that may trigger RNA (often mRNA) degradation or negatively regulate mRNA translation.
|
70 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(60 more) |
MiRNA mediated inhibition of translation GO:0035278
The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs
|
70 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(60 more) |
MiRNA loading onto RISC involved in gene silencing by miRNA GO:0035280
The transfer of a microRNA (miRNA) strand from a miRNA:miRNA duplex onto the RNA-initiated silencing complex (RISC).
|
70 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(60 more) |
Regulation of megakaryocyte differentiation GO:0045652
Any process that modulates the frequency, rate or extent of megakaryocyte differentiation.
|
68 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(58 more) |
MiRNA mediated inhibition of translation GO:0035278
The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs
|
52 |
A3KPK0 (/ISS)
O77503 (/ISS)
Q4KLV6 (/ISS)
Q5ZLG4 (/ISS)
Q5ZMW0 (/ISS)
Q5ZMW0 (/ISS)
Q5ZMW0 (/ISS)
Q6DCX2 (/ISS)
Q6DJB9 (/ISS)
Q6QME8 (/ISS)
(42 more) |
RNA secondary structure unwinding GO:0010501
The process in which a secondary structure of RNA are broken or 'melted'.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
Pre-miRNA processing GO:0031054
Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
Production of miRNAs involved in gene silencing by miRNA GO:0035196
Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
MiRNA mediated inhibition of translation GO:0035278
The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
MiRNA loading onto RISC involved in gene silencing by miRNA GO:0035280
The transfer of a microRNA (miRNA) strand from a miRNA:miRNA duplex onto the RNA-initiated silencing complex (RISC).
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
39 |
Q8CJF9 (/IMP)
Q8CJG0 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
(29 more) |
Regulation of gene silencing by miRNA GO:0060964
Any process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: RNA (often mRNA) cleavage or mRNA translational repression.
|
39 |
Q9UKV8 (/TAS)
Q9UKV8 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
(29 more) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
38 |
Q8CJG0 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(28 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
38 |
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(28 more) |
Positive regulation of NIK/NF-kappaB signaling GO:1901224
Any process that activates or increases the frequency, rate or extent of NIK/NF-kappaB signaling.
|
38 |
Q8CJF9 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
Q8CJG1 (/IMP)
(28 more) |
Nuclear-transcribed mRNA catabolic process GO:0000956
The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells.
|
37 |
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
(27 more) |
Nuclear-transcribed mRNA catabolic process GO:0000956
The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells.
|
37 |
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(27 more) |
Nuclear-transcribed mRNA catabolic process GO:0000956
The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells.
|
37 |
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
(27 more) |
Negative regulation of angiogenesis GO:0016525
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.
|
37 |
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
Q9UL18 (/IMP)
(27 more) |
Negative regulation of angiogenesis GO:0016525
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.
|
37 |
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(27 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
37 |
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(27 more) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
31 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(21 more) |
Regulation of stem cell proliferation GO:0072091
Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
|
19 |
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
Q9H9G7 (/IMP)
(9 more) |
MRNA cleavage involved in gene silencing by miRNA GO:0035279
The process in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
|
13 |
G5EES3 (/IDA)
O16720 (/IDA)
Q27IR0 (/IDA)
Q27IR0 (/IDA)
Q32KD4 (/IDA)
Q32KD4 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
(3 more) |
Gene silencing by miRNA GO:0035195
Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA.
|
10 | O04379 (/IMP) O04379 (/IMP) Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
MRNA cleavage involved in gene silencing by miRNA GO:0035279
The process in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
|
10 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q9UKV8 (/IMP) Q9UKV8 (/IMP) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
9 | A3KPK0 (/ISS) Q4KLV6 (/ISS) Q5ZLG4 (/ISS) Q5ZMW0 (/ISS) Q5ZMW0 (/ISS) Q5ZMW0 (/ISS) Q6T5B7 (/ISS) Q8CJF8 (/ISS) Q8CJF9 (/ISS) |
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
8 | Q27IR0 (/IGI) Q27IR0 (/IGI) Q32KD4 (/IGI) Q32KD4 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Germarium-derived oocyte fate determination GO:0007294
The cell fate determination process in which a germarium-derived cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this is found in Drosophila melanogaster.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Segment polarity determination GO:0007367
Division of the 14 parasegments of the embryo into anterior and posterior compartments; exemplified by the actions of the segment polarity gene products.
|
8 | Q27IR0 (/IGI) Q27IR0 (/IGI) Q32KD4 (/IGI) Q32KD4 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) Q7KY08 (/IGI) |
Synapse assembly GO:0007416
The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).
|
8 | Q27IR0 (/TAS) Q27IR0 (/TAS) Q32KD4 (/TAS) Q32KD4 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) |
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
|
8 | Q27IR0 (/TAS) Q27IR0 (/TAS) Q32KD4 (/TAS) Q32KD4 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) Q7KY08 (/TAS) |
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Targeting of mRNA for destruction involved in RNA interference GO:0030423
The process in which small interfering RNAs target cognate mRNA molecules for degradation.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Germarium-derived female germ-line cyst formation GO:0030727
Formation, in a germarium, of a group of interconnected cells derived from a single female gonial founder cell (a cystoblast). The germarium is the most anterior portion of an insect ovariole. An example of this process is found in Drosophila melanogaster.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Female germ-line stem cell population maintenance GO:0036099
The process by which an organism or tissue maintains a population of female germ-line stem cells.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Habituation GO:0046959
A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Regulation of olfactory learning GO:0090328
Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.
|
8 | Q27IR0 (/IMP) Q27IR0 (/IMP) Q32KD4 (/IMP) Q32KD4 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) Q7KY08 (/IMP) |
Gene silencing by RNA GO:0031047
Any process in which RNA molecules inactivate expression of target genes.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q9QZ81 (/ISS) Q9UKV8 (/ISS) Q9UKV8 (/ISS) |
Pre-miRNA processing GO:0031054
Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
MRNA cleavage involved in gene silencing by miRNA GO:0035279
The process in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
Negative regulation of translational initiation GO:0045947
Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060213
Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q9QZ81 (/ISS) Q9UKV8 (/ISS) Q9UKV8 (/ISS) |
Positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:1900153
Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q9QZ81 (/ISS) Q9UKV8 (/ISS) Q9UKV8 (/ISS) |
Nematode larval development GO:0002119
The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.
|
4 | G5EES3 (/IGI) G5EGR6 (/IGI) O16720 (/IGI) Q86B39 (/IGI) |
Embryo development ending in birth or egg hatching GO:0009792
The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.
|
4 | G5EES3 (/IGI) G5EGR6 (/IGI) O16720 (/IGI) Q86B39 (/IGI) |
Defense response to virus GO:0051607
Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
|
4 | O04379 (/IDA) O04379 (/IDA) Q9XGW1 (/IDA) Q9XGW1 (/IDA) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
3 | Q8CJF8 (/IMP) Q9XGW1 (/IMP) Q9XGW1 (/IMP) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
2 | Q8CJF8 (/ISO) Q8CJF9 (/ISO) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
2 | Q9UKV8 (/NAS) Q9UKV8 (/NAS) |
Male meiotic nuclear division GO:0007140
A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.
|
2 | Q851R2 (/IMP) Q8CJF8 (/IMP) |
Virus induced gene silencing GO:0009616
Specific posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes. This silencing is triggered by viral infection, and occurs through a specific decrease in the level of mRNA of both host and viral genes.
|
2 | O04379 (/IDA) O04379 (/IDA) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
2 | O04379 (/IGI) O04379 (/IGI) |
Auxin metabolic process GO:0009850
The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth.
|
2 | O04379 (/IGI) O04379 (/IGI) |
Regulation of meristem structural organization GO:0009934
Any process that modulates the frequency, rate or extent of meristem organization.
|
2 | Q9XGW1 (/IMP) Q9XGW1 (/IMP) |
Adaxial/abaxial pattern specification GO:0009955
The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Leaf morphogenesis GO:0009965
The process in which the anatomical structures of the leaf are generated and organized.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Response to far red light GO:0010218
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
|
2 | O04379 (/IGI) O04379 (/IGI) |
Leaf vascular tissue pattern formation GO:0010305
Vascular tissue pattern formation as it occurs in the leaf of vascular plants.
|
2 | O04379 (/IMP) O04379 (/IMP) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
2 | Q9UKV8 (/TAS) Q9UKV8 (/TAS) |
Leaf proximal/distal pattern formation GO:0010589
The regionalization process within a leaf by which specific areas of cell differentiation are determined along a proximal/distal axis.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Posttranscriptional gene silencing GO:0016441
The inactivation of gene expression by a posttranscriptional mechanism.
|
2 | O04379 (/IEP) O04379 (/IEP) |
Cell differentiation GO:0030154
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
|
2 | O04379 (/IGI) O04379 (/IGI) |
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
|
2 | Q9UKV8 (/TAS) Q9UKV8 (/TAS) |
Pre-miRNA processing GO:0031054
Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
|
2 | E7EXY4 (/IMP) K4I874 (/IMP) |
Somatic stem cell population maintenance GO:0035019
Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.
|
2 | Q9XGW1 (/IMP) Q9XGW1 (/IMP) |
SiRNA loading onto RISC involved in RNA interference GO:0035087
The transfer of small interfering RNA molecules (siRNAs) from the Dicer family of enzymes that cleave the double-stranded RNA, onto the nuclease-containing RNA-initiated silencing complex (RISC), in the context of RNA interference.
|
2 | Q9UKV8 (/IC) Q9UKV8 (/IC) |
SiRNA loading onto RISC involved in RNA interference GO:0035087
The transfer of small interfering RNA molecules (siRNAs) from the Dicer family of enzymes that cleave the double-stranded RNA, onto the nuclease-containing RNA-initiated silencing complex (RISC), in the context of RNA interference.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Gene silencing by miRNA GO:0035195
Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA.
|
2 | O04379 (/IEP) O04379 (/IEP) |
Production of miRNAs involved in gene silencing by miRNA GO:0035196
Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
MiRNA mediated inhibition of translation GO:0035278
The process in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs
|
2 | Q9UKV8 (/IMP) Q9UKV8 (/IMP) |
Vulval development GO:0040025
The process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.
|
2 | G5EES3 (/IMP) G5EGR6 (/IMP) |
Hermaphrodite genitalia development GO:0040035
The process whose specific outcome is the progression of the hermaphrodite genitalia over time, from formation to the mature structures.
|
2 | G5EES3 (/IMP) G5EGR6 (/IMP) |
Negative regulation of amyloid precursor protein biosynthetic process GO:0042985
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.
|
2 | Q9UKV8 (/ISS) Q9UKV8 (/ISS) |
Nucleate erythrocyte differentiation GO:0043363
The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds.
|
2 | E7EXY4 (/IGI) K4I874 (/IGI) |
Nucleate erythrocyte differentiation GO:0043363
The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds.
|
2 | E7EXY4 (/IMP) K4I874 (/IMP) |
Innate immune response GO:0045087
Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Positive regulation of angiogenesis GO:0045766
Any process that activates or increases angiogenesis.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Negative regulation of translational initiation GO:0045947
Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Adventitious root development GO:0048830
The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Viral gene silencing in virus induced gene silencing GO:0060145
The posttranscriptional gene silencing of viral genes after viral infection.
|
2 | O04379 (/IMP) O04379 (/IMP) |
Small RNA loading onto RISC GO:0070922
The process in which a single-stranded small RNA associates with the RNA-initiated silencing complex (RISC); occurs as part of a process of gene silencing by small RNA.
|
2 | G5EES3 (/IMP) O16720 (/IMP) |
MRNA cleavage involved in gene silencing by siRNA GO:0090625
The process in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
MRNA cleavage involved in gene silencing by siRNA GO:0090625
The process in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA.
|
2 | Q9UKV8 (/IMP) Q9UKV8 (/IMP) |
Positive regulation of trophoblast cell migration GO:1901165
Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.
|
2 | Q9UKV8 (/IMP) Q9UKV8 (/IMP) |
Regulation of shoot apical meristem development GO:1902183
Any process that modulates the frequency, rate or extent of shoot apical meristem development.
|
2 | Q9XGW1 (/IMP) Q9XGW1 (/IMP) |
Positive regulation of miRNA mediated inhibition of translation GO:1905618
Any process that activates or increases the frequency, rate or extent of miRNA mediated inhibition of translation.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Synaptonemal complex assembly GO:0007130
The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.
|
1 | Q8CJF8 (/IMP) |
Female meiotic nuclear division GO:0007143
A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.
|
1 | Q851R2 (/IMP) |
Male gonad development GO:0008584
The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure.
|
1 | Q8CJF8 (/IMP) |
Megagametogenesis GO:0009561
The process whose specific outcome is the progression of the embryo sac over time, from its formation as the megaspore to the mature structure. The process begins when three of the four haploid megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center.
|
1 | Q851R2 (/IMP) |
Response to virus GO:0009615
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
|
1 | Q9SJK3 (/IEP) |
Post-embryonic development GO:0009791
The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development.
|
1 | Q8CJG0 (/IMP) |
Defense response, incompatible interaction GO:0009814
A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
|
1 | Q9SJK3 (/IEP) |
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
|
1 | S4W2D1 (/IMP) |
Stem cell population maintenance GO:0019827
The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.
|
1 | Q69VD5 (/IMP) |
Regulation of cell morphogenesis GO:0022604
Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.
|
1 | Q8CJF8 (/IMP) |
Cell differentiation GO:0030154
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
|
1 | Q9QZ81 (/NAS) |
Gene silencing by RNA GO:0031047
Any process in which RNA molecules inactivate expression of target genes.
|
1 | Q8CJG0 (/IMP) |
Histone H3-K9 demethylation GO:0033169
The modification of histone H3 by the removal of a methyl group from lysine at position 9 of the histone.
|
1 | Q851R2 (/IDA) |
SiRNA loading onto RISC involved in RNA interference GO:0035087
The transfer of small interfering RNA molecules (siRNAs) from the Dicer family of enzymes that cleave the double-stranded RNA, onto the nuclease-containing RNA-initiated silencing complex (RISC), in the context of RNA interference.
|
1 | Q8CJG0 (/ISO) |
MRNA cleavage involved in gene silencing by miRNA GO:0035279
The process in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
|
1 | Q8CJG0 (/ISO) |
Regulation of development, heterochronic GO:0040034
Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached.
|
1 | G5EES3 (/IGI) |
Regulation of cell fate specification GO:0042659
Any process that mediates the adoption of a specific fate by a cell.
|
1 | G5EES3 (/IGI) |
Negative regulation of amyloid precursor protein biosynthetic process GO:0042985
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.
|
1 | Q9QZ81 (/IMP) |
Negative regulation of amyloid precursor protein biosynthetic process GO:0042985
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.
|
1 | Q8CJG0 (/ISO) |
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
|
1 | Q8CJF8 (/IMP) |
Positive regulation of angiogenesis GO:0045766
Any process that activates or increases angiogenesis.
|
1 | Q8CJG0 (/ISO) |
Negative regulation of translational initiation GO:0045947
Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation.
|
1 | Q8CJG0 (/ISO) |
Leaf development GO:0048366
The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.
|
1 | Q69VD5 (/IMP) |
Microgametogenesis GO:0055046
The process whose specific outcome is the progression of the pollen grain over time, from its formation as the microspore to the mature structure.
|
1 | Q851R2 (/IMP) |
Viral gene silencing in virus induced gene silencing GO:0060145
The posttranscriptional gene silencing of viral genes after viral infection.
|
1 | Q9SJK3 (/IGI) |
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060213
Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
|
1 | Q8CJG0 (/IMP) |
Regulation of stem cell proliferation GO:0072091
Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
|
1 | Q8CJF9 (/ISO) |
MRNA cleavage involved in gene silencing by siRNA GO:0090625
The process in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA.
|
1 | Q8CJG0 (/ISO) |
Positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:1900153
Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.
|
1 | Q8CJG0 (/IMP) |
Positive regulation of trophoblast cell migration GO:1901165
Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.
|
1 | Q8CJG0 (/ISO) |
Positive regulation of miRNA mediated inhibition of translation GO:1905618
Any process that activates or increases the frequency, rate or extent of miRNA mediated inhibition of translation.
|
1 | Q8CJG0 (/ISO) |
There are 47 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
87 |
G5EES3 (/IDA)
G5EGR6 (/IDA)
O04379 (/IDA)
O04379 (/IDA)
O16720 (/IDA)
Q27IR0 (/IDA)
Q27IR0 (/IDA)
Q32KD4 (/IDA)
Q32KD4 (/IDA)
Q69VD5 (/IDA)
(77 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
71 |
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
Q9H9G7 (/TAS)
(61 more) |
RISC complex GO:0016442
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.
|
71 |
Q8CJG0 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(61 more) |
RISC-loading complex GO:0070578
A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.
|
71 |
Q8CJG0 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(61 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
53 |
O04379 (/IDA)
O04379 (/IDA)
Q8CJG0 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(43 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
51 |
O04379 (/IDA)
O04379 (/IDA)
Q27IR0 (/IDA)
Q27IR0 (/IDA)
Q32KD4 (/IDA)
Q32KD4 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
(41 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
48 |
Q27IR0 (/IDA)
Q27IR0 (/IDA)
Q32KD4 (/IDA)
Q32KD4 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q7KY08 (/IDA)
Q8CJG0 (/IDA)
Q9UKV8 (/IDA)
(38 more) |
P-body GO:0000932
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. Protein and RNA localized to these foci are involved in mRNA degradation, nonsense-mediated mRNA decay (NMD), translational repression, and RNA-mediated gene silencing.
|
43 |
G5EES3 (/IDA)
G5EGR6 (/IDA)
Q8CJF8 (/IDA)
Q8CJG0 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
Q8CJG1 (/IDA)
(33 more) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
41 |
O77503 (/ISS)
Q6QME8 (/ISS)
Q8CJG0 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
(31 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
41 |
O77503 (/ISS)
Q6QME8 (/ISS)
Q8CJG0 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
Q8CJG1 (/ISS)
(31 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
RISC complex GO:0016442
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
RISC-loading complex GO:0070578
A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.
|
40 |
Q8CJF8 (/ISO)
Q8CJF9 (/ISO)
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(30 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
39 |
Q9UKV8 (/IC)
Q9UKV8 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
Q9UL18 (/IC)
(29 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
39 |
Q9UKV8 (/TAS)
Q9UKV8 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
Q9UL18 (/TAS)
(29 more) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
39 |
Q9UKV8 (/IDA)
Q9UKV8 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
Q9UL18 (/IDA)
(29 more) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
38 |
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(28 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
38 |
Q8CJG0 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
Q8CJG1 (/ISO)
(28 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
33 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(23 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
33 |
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
Q9H9G7 (/HDA)
(23 more) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
19 |
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
Q9H9G7 (/IDA)
(9 more) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
12 |
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
Q9HCK5 (/IDA)
(2 more) |
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
|
8 | Q27IR0 (/IDA) Q27IR0 (/IDA) Q32KD4 (/IDA) Q32KD4 (/IDA) Q7KY08 (/IDA) Q7KY08 (/IDA) Q7KY08 (/IDA) Q7KY08 (/IDA) |
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
RISC-loading complex GO:0070578
A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.
|
6 | O77503 (/ISS) Q6DCX2 (/ISS) Q6DJB9 (/ISS) Q6QME8 (/ISS) Q8CJG0 (/ISS) Q9QZ81 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
3 | Q8CJF8 (/ISO) Q8CJF9 (/ISO) Q8CJG0 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | O04379 (/TAS) O04379 (/TAS) |
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
|
2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
RISC complex GO:0016442
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.
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2 | Q9UKV8 (/IC) Q9UKV8 (/IC) |
RISC complex GO:0016442
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.
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2 | Q9UKV8 (/IPI) Q9UKV8 (/IPI) |
Cell junction GO:0030054
A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
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2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
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2 | Q9UKV8 (/IDA) Q9UKV8 (/IDA) |
Condensed nuclear chromosome GO:0000794
A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome.
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1 | Q8CJF9 (/IDA) |
P-body GO:0000932
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. Protein and RNA localized to these foci are involved in mRNA degradation, nonsense-mediated mRNA decay (NMD), translational repression, and RNA-mediated gene silencing.
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1 | Q8CJG0 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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1 | Q8CJG0 (/ISO) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
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1 | Q851R2 (/IMP) |
Nucleolus organizer region GO:0005731
A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.
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1 | Q851R2 (/IMP) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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1 | Q851R2 (/RCA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
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1 | Q9QZ81 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
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1 | Q8CJG0 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
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1 | Q8CJF8 (/ISO) |
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
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1 | Q8CJG0 (/ISO) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
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1 | Q8CJF8 (/ISO) |
Cell junction GO:0030054
A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
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1 | Q8CJG0 (/ISO) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
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1 | Q8CJG0 (/IDA) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
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1 | Q8CJF9 (/ISO) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
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1 | Q8CJG0 (/ISO) |