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CATH Superfamily 1.25.40.820

Rtr1/RPAP2 domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Browse Functional Families

ID Function Family (FunFam) Name Total Sequences Enzyme? Structure? Structural Representative PDB Sites? Alignment Diversity (0-100)
1
RNA polymerase II subunit B1 CTD phosphatase Rpap2
65 - - 74.3
2
RTR1p CTD phosphatase
16
3D
 5c2yB00 - 39.2
3
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
14 - - 45.4
4
Putative RNA polymerase II subunit B1 CTD phosphatase rtr1
14 - - 76.6
5
Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence
11 - - 22.2
6
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
10 - - 70.2
7
Conserved protein
8 - - 2.9
8
putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
6 - - 13.3
9
Putative RNA polymerase II subunit B1 CTD phosphatase rpap-2
4 - - 56.4
10
Uncharacterized protein
4 - - 10.3
11
AGAP008431-PA
3 - - 8.5
12
Uncharacterized protein
2 - - 24.6
19
Putative RNA polymerase II subunit B1 CTD phosphatase rpap2
2 - - 2.3
13
Uncharacterized protein
2 - - 31.0
15
Uncharacterized protein
2 - - 12.0
18
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein
2 - - 0.0
14
Uncharacterized protein
2 - - 0.0
17
Rtr1/RPAP2 family-domain-containing protein
2 - - 0.0
16
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
2 - - 0.8
29
Uncharacterized protein
1 - - 0.0
20
Chromosome 7, whole genome shotgun sequence
1 - - 0.0
26
RNA polymerase II-associated protein 2
1 - - 0.0
35
Predicted protein
1 - - 0.0
25
Uncharacterized protein
1 - - 0.0
36
Uncharacterized protein
1 - - 0.0
32
Predicted protein
1 - - 0.0
31
Uncharacterized protein
1 - - 0.0
21
Uncharacterized protein
1 - - 0.0
27
Uncharacterized protein
1 - - 0.0
37
Uncharacterized protein
1 - - 0.0
22
Putative RNA polymerase II subunit B1 CTD phosphatase rtr1
1 - - 0.0
33
Uncharacterized protein
1 - - 0.0
38
Predicted protein
1 - - 0.0
23
Uncharacterized protein
1 - - 0.0
28
RNA polymerase II subunit B1 CTD phosphatase
1 - - 0.0
34
Predicted protein
1 - - 0.0
24
Uncharacterized protein
1 - - 0.0
30
Uncharacterized protein
1 - - 0.0