The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 10: Nuclear cap-binding protein subunit 1

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 7 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
20 Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI) Q09161 (/IPI)
(10 more)
RNA cap binding GO:0000339
Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
17 Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA) Q09161 (/HDA)
(7 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
1 Q56A27 (/IC)
RNA 7-methylguanosine cap binding GO:0000340
Interacting selectively and non-covalently with the 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.
1 Q3UYV9 (/ISO)

There are 50 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
17 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(7 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Spliceosomal complex assembly GO:0000245
The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Transcription elongation from RNA polymerase II promoter GO:0006368
The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Termination of RNA polymerase II transcription GO:0006369
The process in which the synthesis of an RNA molecule by RNA polymerase II using a DNA template is completed.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
7-methylguanosine mRNA capping GO:0006370
Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript.
17 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(7 more)
7-methylguanosine mRNA capping GO:0006370
Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Regulation of translational initiation GO:0006446
Any process that modulates the frequency, rate or extent of translational initiation.
17 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(7 more)
Histone mRNA metabolic process GO:0008334
The chemical reactions and pathways involving an mRNA encoding a histone.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Fibroblast growth factor receptor signaling pathway GO:0008543
The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
RNA metabolic process GO:0016070
The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Positive regulation of cell growth GO:0030307
Any process that activates or increases the frequency, rate, extent or direction of cell growth.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Positive regulation of mRNA 3'-end processing GO:0031442
Any process that activates or increases the frequency, rate or extent of mRNA 3'-end processing.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
SnRNA transcription by RNA polymerase II GO:0042795
The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
Nuclear export GO:0051168
The directed movement of substances out of the nucleus.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Pre-mRNA cleavage required for polyadenylation GO:0098789
The targeted, endonucleolytic cleavage of a pre-mRNA, required for polyadenylation of the 3' end. This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
Positive regulation of RNA binding GO:1905216
Any process that activates or increases the frequency, rate or extent of RNA binding.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
Positive regulation of mRNA 3'-end processing GO:0031442
Any process that activates or increases the frequency, rate or extent of mRNA 3'-end processing.
10 Q3UYV9 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q56A27 (/ISS) Q6DIE2 (/ISS)
Pre-mRNA cleavage required for polyadenylation GO:0098789
The targeted, endonucleolytic cleavage of a pre-mRNA, required for polyadenylation of the 3' end. This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.
10 Q3UYV9 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q56A27 (/ISS) Q6DIE2 (/ISS)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
9 C0H906 (/ISS) C0H906 (/ISS) Q3UYV9 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS) Q6DIE2 (/ISS) Q6GQ80 (/ISS) Q6GQ80 (/ISS) Q6GQD0 (/ISS)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
4 Q3UYV9 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS) Q6DIE2 (/ISS)
7-methylguanosine mRNA capping GO:0006370
Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript.
4 Q3UYV9 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS) Q6DIE2 (/ISS)
Regulation of translational initiation GO:0006446
Any process that modulates the frequency, rate or extent of translational initiation.
4 Q3UYV9 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS) Q6DIE2 (/ISS)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
3 Q4V551 (/ISS) Q7K4N3 (/ISS) Q7K4N3 (/ISS)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
2 Q7K4N3 (/IC) Q7K4N3 (/IC)
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
2 Q7K4N3 (/IMP) Q7K4N3 (/IMP)
Positive regulation of cell growth GO:0030307
Any process that activates or increases the frequency, rate, extent or direction of cell growth.
2 Q3UYV9 (/ISS) Q56A27 (/ISS)
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
2 Q7K4N3 (/IMP) Q7K4N3 (/IMP)
Primary miRNA processing GO:0031053
Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
2 Q7K4N3 (/IMP) Q7K4N3 (/IMP)
Gene silencing by miRNA GO:0035195
Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA.
2 Q7K4N3 (/IMP) Q7K4N3 (/IMP)
Negative regulation of viral genome replication GO:0045071
Any process that stops, prevents, or reduces the frequency, rate or extent of viral genome replication.
2 Q7K4N3 (/IMP) Q7K4N3 (/IMP)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
1 Q3UYV9 (/ISO)
Spliceosomal complex assembly GO:0000245
The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
1 Q3UYV9 (/ISO)
7-methylguanosine mRNA capping GO:0006370
Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript.
1 Q3UYV9 (/ISO)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
1 Q3UYV9 (/ISO)
Regulation of translational initiation GO:0006446
Any process that modulates the frequency, rate or extent of translational initiation.
1 Q3UYV9 (/ISO)
Positive regulation of cell growth GO:0030307
Any process that activates or increases the frequency, rate, extent or direction of cell growth.
1 Q3UYV9 (/ISO)
Positive regulation of mRNA 3'-end processing GO:0031442
Any process that activates or increases the frequency, rate or extent of mRNA 3'-end processing.
1 Q3UYV9 (/ISO)
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
1 Q3UYV9 (/ISO)
Pre-mRNA cleavage required for polyadenylation GO:0098789
The targeted, endonucleolytic cleavage of a pre-mRNA, required for polyadenylation of the 3' end. This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.
1 Q3UYV9 (/ISO)
Positive regulation of RNA binding GO:1905216
Any process that activates or increases the frequency, rate or extent of RNA binding.
1 Q3UYV9 (/ISO)

There are 24 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
34 A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA)
(24 more)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
34 A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA)
(24 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
34 A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA) A0A024R179 (/IDA)
(24 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
18 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(8 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
17 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(7 more)
RNA cap binding complex GO:0034518
Any protein complex that binds to a specialized RNA cap structure at any time in the lifetime of the RNA.
17 Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP) Q09161 (/IMP)
(7 more)
RNA cap binding complex GO:0034518
Any protein complex that binds to a specialized RNA cap structure at any time in the lifetime of the RNA.
17 Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS) Q09161 (/TAS)
(7 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
17 Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA) Q09161 (/IDA)
(7 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
11 Q3UYV9 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q4R440 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS)
(1 more)
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
4 Q3UYV9 (/ISS) Q56A27 (/ISS) Q5ZJZ6 (/ISS) Q6DIE2 (/ISS)
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
2 Q7K4N3 (/HDA) Q7K4N3 (/HDA)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
2 Q7K4N3 (/HDA) Q7K4N3 (/HDA)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
2 Q3UYV9 (/ISS) Q56A27 (/ISS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q3UYV9 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
1 Q3UYV9 (/ISO)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q3UYV9 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q3UYV9 (/ISO)
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
1 Q3UYV9 (/ISO)
Nuclear cap binding complex GO:0005846
A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.
1 Q56A27 (/IDA)
Nuclear cap binding complex GO:0005846
A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.
1 Q3UYV9 (/ISO)
RNA cap binding complex GO:0034518
Any protein complex that binds to a specialized RNA cap structure at any time in the lifetime of the RNA.
1 Q3UYV9 (/ISO)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
1 Q3UYV9 (/ISO)
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