The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Translin; domain 2
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 2: Putative translin

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 13 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
26 Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI)
(16 more)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
23 Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI) Q15631 (/IPI)
(13 more)
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
22 Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS)
(12 more)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
4 A0A1B0GWQ7 (/IDA) E9PT79 (/IDA) Q71SY3 (/IDA) Q71SY3 (/IDA)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
3 Q62348 (/IDA) Q62348 (/IDA) Q9P7V3 (/IDA)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
2 Q62348 (/IDA) Q62348 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
2 Q62348 (/ISO) Q62348 (/ISO)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
2 Q62348 (/ISO) Q62348 (/ISO)
Endoribonuclease activity GO:0004521
Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
1 Q7JVK6 (/IDA)
Microsatellite binding GO:0035939
Interacting selectively and non-covalently with a microsatellite, a repeat_region in DNA containing repeat units (2 to 4 base pairs) that is repeated multiple times in tandem.
1 Q9P7V3 (/IDA)
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
1 Q7JVK6 (/IPI)
Single-stranded telomeric DNA binding GO:0043047
Interacting selectively and non-covalently with single-stranded telomere-associated DNA.
1 Q9P7V3 (/IDA)
GU repeat RNA binding GO:1990605
Interacting selectively and non-covalently with an RNA molecule containing GU repeats.
1 Q9P7V3 (/IDA)

There are 7 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
DNA recombination GO:0006310
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
22 Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS)
(12 more)
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
22 Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS)
(12 more)
TRNA processing GO:0008033
The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
1 Q9P7V3 (/TAS)
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
1 Q7JVK6 (/IMP)
Negative regulation of circadian sleep/wake cycle, sleep GO:0042321
Any process that stops, prevents or reduces the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.
1 Q7JVK6 (/IMP)
Behavioral response to starvation GO:0042595
Any process that results in a change in the behavior of an organism as a result of deprivation of nourishment.
1 Q7JVK6 (/IMP)
Protein stabilization GO:0050821
Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.
1 Q7JVK6 (/IMP)

There are 8 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
22 Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS)
(12 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
22 Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS) Q15631 (/TAS)
(12 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
2 Q62348 (/IDA) Q62348 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q62348 (/IDA) Q62348 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q62348 (/TAS) Q62348 (/TAS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q9P7V3 (/HDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q9P7V3 (/HDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q7JVK6 (/IDA)
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