CATH Superfamily 1.20.58.1030
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 3: DNA replication complex GINS protein PSF1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 1 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
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9 | Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Double-strand break repair via break-induced replication GO:0000727
The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome.
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9 | Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) |
DNA-dependent DNA replication GO:0006261
A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.
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9 | Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) |
DNA replication initiation GO:0006270
The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate.
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3 | G4MSB0 (/ISS) G4MSB0 (/ISS) G4MSB0 (/ISS) |
Mitotic DNA replication initiation GO:1902975
Any DNA replication initiation involved in mitotic cell cycle DNA replication.
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1 | Q9P7X6 (/IMP) |
DNA strand elongation involved in mitotic DNA replication GO:1902983
Any DNA strand elongation involved in mitotic cell cycle DNA replication.
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1 | Q9P7X6 (/IMP) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
GINS complex GO:0000811
A heterotetrameric protein complex that associates with replication origins, where it is required for the initiation of DNA replication, and with replication forks.
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9 | Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) Q12488 (/IPI) |
DNA replication preinitiation complex GO:0031261
A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.
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9 | Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) Q12488 (/IGI) |
DNA replication preinitiation complex GO:0031261
A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.
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9 | Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) Q12488 (/IMP) |
Replication fork protection complex GO:0031298
A protein complex conserved in eukaryotes and associated with the replication fork; the complex stabilizes stalled replication forks and is thought to be involved in coordinating leading- and lagging-strand synthesis and in replication checkpoint signaling.
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9 | Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) |
CMG complex GO:0071162
A protein complex that contains the GINS complex, Cdc45p, and the heterohexameric MCM complex, and that is involved in unwinding DNA during replication.
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9 | Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) Q12488 (/IDA) |
GINS complex GO:0000811
A heterotetrameric protein complex that associates with replication origins, where it is required for the initiation of DNA replication, and with replication forks.
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4 | G4MSB0 (/ISS) G4MSB0 (/ISS) G4MSB0 (/ISS) Q9P7X6 (/ISS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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3 | G4MSB0 (/ISS) G4MSB0 (/ISS) G4MSB0 (/ISS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
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3 | G4MSB0 (/ISS) G4MSB0 (/ISS) G4MSB0 (/ISS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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1 | Q9P7X6 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
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1 | Q9P7X6 (/HDA) |
Nuclear replication fork GO:0043596
The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.
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1 | Q9P7X6 (/IC) |