CATH Superfamily 1.20.5.190
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 19: Calmodulin-binding transcription activator 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
9 | A0A0B4LF06 (/IDA) A0A0B4LF15 (/IDA) A0SQK5 (/IDA) A1Z7V0 (/IDA) B7YZS4 (/IDA) B7YZU4 (/IDA) B7YZU5 (/IDA) E1JH18 (/IDA) Q95RQ6 (/IDA) |
|
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
9 | A0A0B4LF06 (/ISS) A0A0B4LF15 (/ISS) A0SQK5 (/ISS) A1Z7V0 (/ISS) B7YZS4 (/ISS) B7YZU4 (/ISS) B7YZU5 (/ISS) E1JH18 (/ISS) Q95RQ6 (/ISS) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
9 | A0A0B4LF06 (/ISS) A0A0B4LF15 (/ISS) A0SQK5 (/ISS) A1Z7V0 (/ISS) B7YZS4 (/ISS) B7YZU4 (/ISS) B7YZU5 (/ISS) E1JH18 (/ISS) Q95RQ6 (/ISS) |
|
Calmodulin binding GO:0005516
Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
|
9 | A0A0B4LF06 (/ISS) A0A0B4LF15 (/ISS) A0SQK5 (/ISS) A1Z7V0 (/ISS) B7YZS4 (/ISS) B7YZU4 (/ISS) B7YZU5 (/ISS) E1JH18 (/ISS) Q95RQ6 (/ISS) |
|
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
9 | A0A0B4LF06 (/IPI) A0A0B4LF15 (/IPI) A0SQK5 (/IPI) A1Z7V0 (/IPI) B7YZS4 (/IPI) B7YZU4 (/IPI) B7YZU5 (/IPI) E1JH18 (/IPI) Q95RQ6 (/IPI) |
There are 4 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Response to light stimulus GO:0009416
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
|
9 | A0A0B4LF06 (/IMP) A0A0B4LF15 (/IMP) A0SQK5 (/IMP) A1Z7V0 (/IMP) B7YZS4 (/IMP) B7YZU4 (/IMP) B7YZU5 (/IMP) E1JH18 (/IMP) Q95RQ6 (/IMP) |
|
Deactivation of rhodopsin mediated signaling GO:0016059
The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).
|
9 | A0A0B4LF06 (/IMP) A0A0B4LF15 (/IMP) A0SQK5 (/IMP) A1Z7V0 (/IMP) B7YZS4 (/IMP) B7YZU4 (/IMP) B7YZU5 (/IMP) E1JH18 (/IMP) Q95RQ6 (/IMP) |
|
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
9 | A0A0B4LF06 (/ISS) A0A0B4LF15 (/ISS) A0SQK5 (/ISS) A1Z7V0 (/ISS) B7YZS4 (/ISS) B7YZU4 (/ISS) B7YZU5 (/ISS) E1JH18 (/ISS) Q95RQ6 (/ISS) |
|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
9 | A0A0B4LF06 (/IDA) A0A0B4LF15 (/IDA) A0SQK5 (/IDA) A1Z7V0 (/IDA) B7YZS4 (/IDA) B7YZU4 (/IDA) B7YZU5 (/IDA) E1JH18 (/IDA) Q95RQ6 (/IDA) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
9 | A0A0B4LF06 (/IDA) A0A0B4LF15 (/IDA) A0SQK5 (/IDA) A1Z7V0 (/IDA) B7YZS4 (/IDA) B7YZU4 (/IDA) B7YZU5 (/IDA) E1JH18 (/IDA) Q95RQ6 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
9 | A0A0B4LF06 (/ISS) A0A0B4LF15 (/ISS) A0SQK5 (/ISS) A1Z7V0 (/ISS) B7YZS4 (/ISS) B7YZU4 (/ISS) B7YZU5 (/ISS) E1JH18 (/ISS) Q95RQ6 (/ISS) |
