CATH Superfamily 1.20.5.110
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 50: Vesicle-associated membrane protein 4
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 1 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
15 |
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
O75379 (/IPI)
(5 more) |
There are 18 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
|
15 |
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
(5 more) |
SNARE complex assembly GO:0035493
The aggregation, arrangement and bonding together of a set of components to form a SNARE complex, a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.
|
15 |
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
(5 more) |
Membrane organization GO:0061024
A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Golgi ribbon formation GO:0090161
The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.
|
15 |
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
O75379 (/IMP)
(5 more) |
Synaptic vesicle to endosome fusion GO:0016189
Fusion of a synaptic vesicle with an endosome.
|
3 | A0A096MJ99 (/IDA) D4A560 (/IDA) D4A560 (/IDA) |
Synaptic vesicle to endosome fusion GO:0016189
Fusion of a synaptic vesicle with an endosome.
|
3 | A0A096MJ99 (/IMP) D4A560 (/IMP) D4A560 (/IMP) |
Regulation of synaptic vesicle endocytosis GO:1900242
Any process that modulates the frequency, rate or extent of synaptic vesicle endocytosis.
|
3 | A0A096MJ99 (/EXP) D4A560 (/EXP) D4A560 (/EXP) |
Regulation of synaptic vesicle endocytosis GO:1900242
Any process that modulates the frequency, rate or extent of synaptic vesicle endocytosis.
|
3 | A0A096MJ99 (/IDA) D4A560 (/IDA) D4A560 (/IDA) |
Regulation of synaptic vesicle endocytosis GO:1900242
Any process that modulates the frequency, rate or extent of synaptic vesicle endocytosis.
|
3 | A0A096MJ99 (/IMP) D4A560 (/IMP) D4A560 (/IMP) |
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
|
1 | O70480 (/ISO) |
Synaptic vesicle to endosome fusion GO:0016189
Fusion of a synaptic vesicle with an endosome.
|
1 | O70480 (/ISO) |
SNARE complex assembly GO:0035493
The aggregation, arrangement and bonding together of a set of components to form a SNARE complex, a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.
|
1 | O70480 (/ISO) |
Regulation of Golgi to plasma membrane protein transport GO:0042996
Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.
|
1 | O70480 (/IMP) |
Golgi to plasma membrane protein transport GO:0043001
The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.
|
1 | O70480 (/IMP) |
Cellular response to interferon-gamma GO:0071346
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.
|
1 | O70480 (/IDA) |
Golgi ribbon formation GO:0090161
The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.
|
1 | O70480 (/ISO) |
Regulation of synaptic vesicle endocytosis GO:1900242
Any process that modulates the frequency, rate or extent of synaptic vesicle endocytosis.
|
1 | O70480 (/ISO) |
Toxin transport GO:1901998
The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
1 | O70480 (/IMP) |
There are 19 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
16 |
O70480 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
(6 more) |
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Lysosome GO:0005764
A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Cell surface GO:0009986
The external part of the cell wall and/or plasma membrane.
|
15 |
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
O75379 (/IDA)
(5 more) |
Transport vesicle GO:0030133
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Clathrin-coated vesicle membrane GO:0030665
The lipid bilayer surrounding a clathrin-coated vesicle.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Trans-Golgi network membrane GO:0032588
The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.
|
15 |
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
O75379 (/TAS)
(5 more) |
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
|
2 | D4A560 (/IDA) D4A560 (/IDA) |
Integral component of synaptic vesicle membrane GO:0030285
The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
2 | D4A560 (/IDA) D4A560 (/IDA) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
1 | O70480 (/ISO) |
Trans-Golgi network GO:0005802
The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.
|
1 | O70480 (/IDA) |
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
|
1 | O70480 (/ISO) |
Cell surface GO:0009986
The external part of the cell wall and/or plasma membrane.
|
1 | O70480 (/ISO) |
Integral component of synaptic vesicle membrane GO:0030285
The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
1 | O70480 (/ISO) |
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
|
1 | O70480 (/IDA) |
Phagocytic vesicle GO:0045335
A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
|
1 | O70480 (/IDA) |
Integral component of presynaptic endosome membrane GO:0099067
The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
1 | O70480 (/IDA) |