The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 20: synaptobrevin homolog YKT6

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 9 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
SNAP receptor activity GO:0005484
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
24 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(14 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
24 A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI) A4D2J0 (/IPI)
(14 more)
Protein-cysteine S-palmitoyltransferase activity GO:0019706
Catalysis of the transfer of a palmitoyl group to a sulfur atom on the cysteine of a protein molecule.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Cadherin binding GO:0045296
Interacting selectively and non-covalently with cadherin, a type I membrane protein involved in cell adhesion.
14 O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA) O15498 (/HDA)
(4 more)
Protein-cysteine S-palmitoyltransferase activity GO:0019706
Catalysis of the transfer of a palmitoyl group to a sulfur atom on the cysteine of a protein molecule.
12 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
(2 more)
Palmitoyltransferase activity GO:0016409
Catalysis of the transfer of a palmitoyl (CH3-
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
SNAP receptor activity GO:0005484
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
SNAP receptor activity GO:0005484
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
2 O60073 (/ISO) Q9CQW1 (/ISO)
Protein-cysteine S-palmitoyltransferase activity GO:0019706
Catalysis of the transfer of a palmitoyl group to a sulfur atom on the cysteine of a protein molecule.
1 Q9CQW1 (/ISO)

There are 23 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
14 O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS)
(4 more)
Vesicle targeting GO:0006903
The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Vesicle docking involved in exocytosis GO:0006904
The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Retrograde transport, endosome to Golgi GO:0042147
The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
12 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
(2 more)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Intra-Golgi vesicle-mediated transport GO:0006891
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Vesicle fusion GO:0006906
Fusion of the membrane of a transport vesicle with its target membrane.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Vacuole fusion, non-autophagic GO:0042144
The fusion of two vacuole membranes to form a single vacuole.
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Vesicle targeting GO:0006903
The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.
7 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS)
Vesicle docking involved in exocytosis GO:0006904
The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
7 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS)
Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006890
The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
Vacuole inheritance GO:0000011
The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Filamentous growth GO:0030447
The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Filamentous growth of a population of unicellular organisms in response to biotic stimulus GO:0036180
The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a biotic (living) stimulus.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Intracellular protein transport GO:0006886
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
1 O60073 (/NAS)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
1 Q9CQW1 (/ISO)
Vesicle targeting GO:0006903
The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.
1 Q9CQW1 (/ISO)
Vesicle docking involved in exocytosis GO:0006904
The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
1 Q9CQW1 (/ISO)
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
1 O60073 (/ISO)
Retrograde transport, endosome to Golgi GO:0042147
The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
1 Q9CQW1 (/ISO)

There are 37 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
29 A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA)
(19 more)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
28 A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA) A4D2J0 (/IDA)
(18 more)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
25 F4KDI1 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(15 more)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
24 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(14 more)
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
19 O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS) O15498 (/ISS)
(9 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
15 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(5 more)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
14 O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS)
(4 more)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
14 O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA) O15498 (/IDA)
(4 more)
Transport vesicle GO:0030133
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.
14 O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS)
(4 more)
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
14 O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS)
(4 more)
Endoplasmic reticulum-Golgi intermediate compartment membrane GO:0033116
The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.
14 O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS) O15498 (/TAS)
(4 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
11 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
(1 more)
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
11 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
(1 more)
Fungal-type vacuole GO:0000324
A vacuole that has both lytic and storage functions. The fungal vacuole is a large, membrane-bounded organelle that functions as a reservoir for the storage of small molecules (including polyphosphate, amino acids, several divalent cations (e.g. calcium), other ions, and other small molecules) as well as being the primary compartment for degradation. It is an acidic compartment, containing an ensemble of acid hydrolases. At least in S. cerevisiae, there are indications that the morphology of the vacuole is variable and correlated with the cell cycle, with logarithmically growing cells having a multilobed, reticulated vacuole, while stationary phase cells contain a single large structure.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
10 P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
10 P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
7 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
7 Q32N70 (/ISS) Q32N70 (/ISS) Q3T000 (/ISS) Q3T000 (/ISS) Q5EGY4 (/ISS) Q9CQW1 (/ISS) Q9TXZ9 (/ISS)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
Transport vesicle GO:0030133
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.
5 Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS) Q9W3M8 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q9CQW1 (/ISO)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q9CQW1 (/ISO)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
1 Q9CQW1 (/ISO)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
1 Q9CQW1 (/ISO)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
1 Q9CQW1 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q9CQW1 (/ISO)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
1 Q9CQW1 (/ISO)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
1 Q9CQW1 (/ISO)
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
1 Q9CQW1 (/ISO)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
1 Q5EGY4 (/IDA)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
1 Q9CQW1 (/ISO)
Apical dendrite GO:0097440
A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
1 Q5EGY4 (/IDA)
Apical dendrite GO:0097440
A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
1 Q9CQW1 (/ISO)
Basal dendrite GO:0097441
A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.
1 Q5EGY4 (/IDA)
Basal dendrite GO:0097441
A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.
1 Q9CQW1 (/ISO)
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