The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 11: B-cell receptor-associated protein 29

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 4 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
5 P51572 (/IPI) P51572 (/IPI) P51572 (/IPI) Q61335 (/IPI) Q6AY58 (/IPI)
MHC class I protein binding GO:0042288
Interacting selectively and non-covalently with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.
1 Q61335 (/IPI)
Ion channel binding GO:0044325
Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
1 A5X380 (/IDA)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
1 Q61335 (/IDA)

There are 26 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Osteoblast differentiation GO:0001649
The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.
4 Q9UHQ4 (/HDA) Q9UHQ4 (/HDA) Q9UHQ4 (/HDA) Q9UHQ4 (/HDA)
Antigen processing and presentation of peptide antigen via MHC class I GO:0002474
The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.
3 P51572 (/TAS) P51572 (/TAS) P51572 (/TAS)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
3 Q61334 (/IGI) Q61334 (/IGI) Q61335 (/IGI)
Positive regulation of cytosolic calcium ion concentration GO:0007204
Any process that increases the concentration of calcium ions in the cytosol.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Negative regulation of endoplasmic reticulum calcium ion concentration GO:0032471
Any process that decreases the concentration of calcium ions in the endoplasmic reticulum.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Calcium-mediated signaling using intracellular calcium source GO:0035584
A series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Positive regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0043280
Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Positive regulation of mitochondrial calcium ion concentration GO:0051561
Any process that increases the concentration of calcium ions in mitochondria.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Protein localization to endoplasmic reticulum exit site GO:0070973
A process in which a protein is transported to, or maintained in, a location at an endoplasmic reticulum exit site.
3 Q61334 (/IGI) Q61334 (/IGI) Q61335 (/IGI)
Positive regulation of ER-associated ubiquitin-dependent protein catabolic process GO:1903071
Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.
3 P51572 (/IGI) P51572 (/IGI) P51572 (/IGI)
Positive regulation of retrograde protein transport, ER to cytosol GO:1904154
Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.
3 P51572 (/IDA) P51572 (/IDA) P51572 (/IDA)
Positive regulation of intrinsic apoptotic signaling pathway GO:2001244
Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.
3 P51572 (/IMP) P51572 (/IMP) P51572 (/IMP)
Positive regulation of ER-associated ubiquitin-dependent protein catabolic process GO:1903071
Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.
2 E2R5S2 (/IC) E2R5S2 (/IC)
Positive regulation of retrograde protein transport, ER to cytosol GO:1904154
Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.
2 E2R5S2 (/IMP) E2R5S2 (/IMP)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
1 Q61335 (/IMP)
Positive regulation of cytosolic calcium ion concentration GO:0007204
Any process that increases the concentration of calcium ions in the cytosol.
1 Q61335 (/ISO)
Spermatogenesis GO:0007283
The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
1 Q61335 (/IEP)
Negative regulation of endoplasmic reticulum calcium ion concentration GO:0032471
Any process that decreases the concentration of calcium ions in the endoplasmic reticulum.
1 Q61335 (/ISO)
Calcium-mediated signaling using intracellular calcium source GO:0035584
A series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.
1 Q61335 (/ISO)
Positive regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0043280
Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.
1 Q61335 (/ISO)
Positive regulation of mitochondrial calcium ion concentration GO:0051561
Any process that increases the concentration of calcium ions in mitochondria.
1 Q61335 (/ISO)
Positive regulation of ER-associated ubiquitin-dependent protein catabolic process GO:1903071
Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.
1 A5X380 (/IMP)
Positive regulation of ER-associated ubiquitin-dependent protein catabolic process GO:1903071
Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.
1 Q61335 (/ISO)
Positive regulation of retrograde protein transport, ER to cytosol GO:1904154
Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.
1 Q61335 (/ISO)
Positive regulation of retrograde protein transport, ER to cytosol GO:1904154
Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.
1 A5X380 (/ISS)
Positive regulation of intrinsic apoptotic signaling pathway GO:2001244
Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.
1 Q61335 (/ISO)

There are 23 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
7 A5X380 (/IDA) P51572 (/IDA) P51572 (/IDA) P51572 (/IDA) Q8L702 (/IDA) Q8L702 (/IDA) Q93XZ7 (/IDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
7 P51572 (/HDA) P51572 (/HDA) P51572 (/HDA) Q9UHQ4 (/HDA) Q9UHQ4 (/HDA) Q9UHQ4 (/HDA) Q9UHQ4 (/HDA)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
3 P51572 (/TAS) P51572 (/TAS) P51572 (/TAS)
Lipid droplet GO:0005811
An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.
3 P51572 (/IDA) P51572 (/IDA) P51572 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
3 P51572 (/TAS) P51572 (/TAS) P51572 (/TAS)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
3 P51572 (/IDA) P51572 (/IDA) P51572 (/IDA)
Integral component of lumenal side of endoplasmic reticulum membrane GO:0071556
The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the lumenal side of the membrane.
3 P51572 (/TAS) P51572 (/TAS) P51572 (/TAS)
Perinuclear endoplasmic reticulum GO:0097038
The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.
3 P51572 (/IDA) P51572 (/IDA) P51572 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
1 Q61335 (/IDA)
Vacuolar membrane GO:0005774
The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
1 Q93XZ7 (/IDA)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
1 Q61335 (/ISO)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
1 Q6AY58 (/IDA)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
1 Q61335 (/ISO)
Lipid droplet GO:0005811
An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.
1 Q61335 (/ISO)
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
1 Q61335 (/ISO)
Plasmodesma GO:0009506
A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.
1 Q93XZ7 (/IDA)
Endomembrane system GO:0012505
A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
1 Q9W0M4 (/HDA)
Clathrin-coated vesicle GO:0030136
A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
1 Q6AY58 (/IDA)
Clathrin-coated vesicle GO:0030136
A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
1 Q61335 (/ISO)
Golgi cisterna membrane GO:0032580
The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.
1 Q6AY58 (/IDA)
Golgi cisterna membrane GO:0032580
The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.
1 Q61335 (/ISO)
Membrane raft GO:0045121
Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
1 G5EBI0 (/HDA)
Perinuclear endoplasmic reticulum GO:0097038
The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.
1 Q61335 (/ISO)
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