CATH Superfamily 1.20.1280.50
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 6: Transport inhibitor response 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 9 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Inositol hexakisphosphate binding GO:0000822
Interacting selectively and non-covalently with inositol hexakisphosphate.
|
31 |
A2XSX3 (/ISS)
A2XSX3 (/ISS)
A4KA30 (/ISS)
A5AML2 (/ISS)
A5ARV5 (/ISS)
A5ARV5 (/ISS)
A5C819 (/ISS)
A5JVC9 (/ISS)
A5JVC9 (/ISS)
A5JVD6 (/ISS)
(21 more) |
Auxin binding GO:0010011
Interacting selectively and non-covalently with auxin, plant hormones that regulate aspects of plant growth.
|
8 | Q570C0 (/IGI) Q570C0 (/IGI) Q9LPW7 (/IGI) Q9LPW7 (/IGI) Q9LW29 (/IGI) Q9LW29 (/IGI) Q9ZR12 (/IGI) Q9ZR12 (/IGI) |
Auxin binding GO:0010011
Interacting selectively and non-covalently with auxin, plant hormones that regulate aspects of plant growth.
|
8 | Q2R3K5 (/ISS) Q7XVM8 (/ISS) Q9LPW7 (/ISS) Q9LPW7 (/ISS) Q9LW29 (/ISS) Q9LW29 (/ISS) Q9ZR12 (/ISS) Q9ZR12 (/ISS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | Q570C0 (/IPI) Q570C0 (/IPI) Q9LW29 (/IPI) Q9LW29 (/IPI) Q9ZR12 (/IPI) Q9ZR12 (/IPI) |
Inositol hexakisphosphate binding GO:0000822
Interacting selectively and non-covalently with inositol hexakisphosphate.
|
2 | Q570C0 (/IDA) Q570C0 (/IDA) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
2 | Q570C0 (/IC) Q570C0 (/IC) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
2 | Q9ZR12 (/ISS) Q9ZR12 (/ISS) |
Auxin binding GO:0010011
Interacting selectively and non-covalently with auxin, plant hormones that regulate aspects of plant growth.
|
2 | Q570C0 (/IDA) Q570C0 (/IDA) |
Auxin receptor activity GO:0038198
Combining with auxin and transmitting the signal in the cell to initiate a change in cell activity. Auxin is a plant hormone (phytohormone).
|
2 | Q570C0 (/IDA) Q570C0 (/IDA) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Auxin-activated signaling pathway GO:0009734
A series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.
|
31 |
A2XSX3 (/ISS)
A2XSX3 (/ISS)
A4KA30 (/ISS)
A5AML2 (/ISS)
A5ARV5 (/ISS)
A5ARV5 (/ISS)
A5C819 (/ISS)
A5JVC9 (/ISS)
A5JVC9 (/ISS)
A5JVD6 (/ISS)
(21 more) |
Pollen maturation GO:0010152
The final stages of microgametogenesis after the trinucleate stage has been reached resulting in viable pollen grains.
|
8 | Q570C0 (/IGI) Q570C0 (/IGI) Q9LPW7 (/IGI) Q9LPW7 (/IGI) Q9LW29 (/IGI) Q9LW29 (/IGI) Q9ZR12 (/IGI) Q9ZR12 (/IGI) |
Stamen development GO:0048443
The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure.
|
6 | Q570C0 (/IGI) Q570C0 (/IGI) Q9LPW7 (/IGI) Q9LPW7 (/IGI) Q9LW29 (/IGI) Q9LW29 (/IGI) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
4 | Q570C0 (/IMP) Q570C0 (/IMP) Q9ZR12 (/IMP) Q9ZR12 (/IMP) |
Auxin-activated signaling pathway GO:0009734
A series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.
|
4 | Q570C0 (/IMP) Q570C0 (/IMP) Q9LW29 (/IMP) Q9LW29 (/IMP) |
Lateral root formation GO:0010311
The process that gives rise to a lateral root. This process pertains to the initial formation of a structure from unspecified parts. A lateral root primordium represents an organized group of cells derived from the root pericycle that will differentiate into a new root, as opposed to the initiation of the main root from the embryo proper.
|
2 | Q570C0 (/IMP) Q570C0 (/IMP) |
Cellular response to phosphate starvation GO:0016036
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
|
2 | Q570C0 (/IEP) Q570C0 (/IEP) |
Carbon catabolite repression of transcription by glucose GO:0045014
A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.
|
2 | Q9ZR12 (/TAS) Q9ZR12 (/TAS) |
Lateral root development GO:0048527
The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
|
2 | Q9LPW7 (/IMP) Q9LPW7 (/IMP) |
Cellular response to nitrate GO:0071249
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.
|
2 | Q9LPW7 (/IEP) Q9LPW7 (/IEP) |
Primary root development GO:0080022
The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.
|
2 | Q9LPW7 (/IMP) Q9LPW7 (/IMP) |
There are 4 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
SCF ubiquitin ligase complex GO:0019005
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
|
8 | Q2R3K5 (/ISS) Q7XVM8 (/ISS) Q9LPW7 (/ISS) Q9LPW7 (/ISS) Q9LW29 (/ISS) Q9LW29 (/ISS) Q9ZR12 (/ISS) Q9ZR12 (/ISS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q9ZR12 (/IDA) Q9ZR12 (/IDA) |
Vacuolar membrane GO:0005774
The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
|
2 | Q9LW29 (/IDA) Q9LW29 (/IDA) |
SCF ubiquitin ligase complex GO:0019005
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
|
2 | Q570C0 (/IDA) Q570C0 (/IDA) |