CATH Superfamily 1.20.1250.40

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	DNA-directed RNA polymerase II subunit RPB4	211	3D	5iydD00	-	74.3
2	DNA-directed RNA polymerase III subunit RPC9	95		-	-	92.0
3	DNA-directed RNA polymerase II subunit rpb4	85	3D	3h0gP00	-	76.5
4	Dna-directed rna polymerase ii subunit 4	82		-	-	64.5
7	DNA-directed RNA polymerase II subunit RPB4	68	3D	5u5qD02	-	36.8
5	DNA-directed RNA polymerase III subunit RPC9 isoform X5	23		-	-	10.4
6	DNA-directed RNA polymerase II 16 kDa subunit, putative	17		-	-	2.6
8	RNA polymerase II, Rpb4, core protein	16		-	-	75.3
9	Dna-directed rna polymerase ii subunit rpb4-like	14		-	-	10.0
11	RNA polymerase C	10		-	-	14.7
10	RNA Polymerase II B	10		-	-	70.9
12	Unplaced genomic scaffold supercont1.20, whole genome shotgun sequence	9		-	-	10.1
13	RNA_polymerase_Rpb4	9		-	-	12.2
15	Uncharacterized protein	8		-	-	17.8
14	RNA polymerase II Rpb4 core protein	8		-	-	44.8
16	Uncharacterized protein	7		-	-	5.0
17	DNA-directed RNA polymerase II subunit RPB4	6		-	-	3.9
18	WGS project CABT00000000 data, contig 2.3	5		-	-	5.2
19	Related to Rpb4-16 kD subunit of DNA-directed RNA polymerase II	5		-	-	15.2
20	DNA-directed RNA polymerase III subunit rpc9	4		-	-	50.2
21	DNA-directed RNA polymerase III subunit, putative	3		-	-	5.0
32	DNA-directed RNA polymerase II subunit	2		-	-	1.6
27	HRDC-like protein	2		-	-	0.0
31	DNA-directed RNA polymerases II subunit, putative	2		-	-	0.0
29	RNA polymerase Rpb4-domain-containing protein	2		-	-	3.7
24	DNA-directed RNA polymerases IV and V subunit 4	2		-	-	12.1
23	Predicted protein	2		-	-	5.4
33	Uncharacterized protein	2		-	-	0.0
26	Uncharacterized protein	2		-	-	7.5
30	Uncharacterized protein	2		-	-	0.0
25	Uncharacterized protein	2		-	-	11.7
28	AaceriAGR317Cp	2		-	-	5.8
22	DNA-directed RNA polymerase III subunit rpc9	2		-	-	25.2
34	Uncharacterized protein	2		-	-	0.0
44	Uncharacterized protein	1		-	-	0.0
35	Uncharacterized protein	1		-	-	0.0
47	Uncharacterized protein	1		-	-	0.0
37	Uncharacterized protein	1		-	-	0.0
43	Uncharacterized protein	1		-	-	0.0
48	Uncharacterized protein	1		-	-	0.0
39	Protein CBG03003	1		-	-	0.0
41	DNA-directed RNA polymerase II subunit D	1		-	-	0.0
45	Uncharacterized protein	1		-	-	0.0
40	Uncharacterized protein	1		-	-	0.0
42	Uncharacterized protein	1		-	-	0.0
46	Peptide-receptor component	1		-	-	0.0
36	Uncharacterized protein	1		-	-	0.0
38	Uncharacterized protein	1		-	-	0.0