CATH Superfamily 1.10.8.60
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 11: ATP-dependent Clp protease ATP-binding subunit
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 9 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
136 |
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
P0ABH9 (/IPI)
(126 more) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
136 |
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
(126 more) |
ATP-dependent peptidase activity GO:0004176
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
|
126 |
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
(116 more) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
124 |
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
(114 more) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
124 |
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
(114 more) |
Peptidase activity GO:0008233
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
|
9 | Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
9 | P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) P9WPC9 (/IPI) |
Protein folding chaperone GO:0044183
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) that contributes to the process of protein folding.
|
9 | P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) P9WPC9 (/IMP) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
3 | P42762 (/IDA) P42762 (/IDA) Q9SXJ7 (/IDA) |
There are 20 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Response to oxidative stress GO:0006979
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
|
124 |
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
(114 more) |
Protein unfolding GO:0043335
The process of assisting in the disassembly of non-covalent linkages in a protein or protein aggregate, often where the proteins are in a non-functional or denatured state.
|
124 |
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
P0ABH9 (/IMP)
(114 more) |
DNA mediated transformation GO:0009294
The introduction and uptake of foreign genetic material (DNA or RNA) into a cell, and often the expression of that genetic material.
|
45 |
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
A0A0J1HLL8 (/ISS)
(35 more) |
Stress response to copper ion GO:1990169
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a copper ion stimulus.
|
16 |
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
(6 more) |
Stress response to cadmium ion GO:1990170
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a cadmium ion stimulus.
|
16 |
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
Q2G0P5 (/IDA)
(6 more) |
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
|
9 | Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) Q9KSW2 (/ISS) |
Protein hexamerization GO:0034214
The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.
|
3 | P42762 (/IDA) P42762 (/IDA) Q9SXJ7 (/IDA) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
2 | Q9FI56 (/IMP) Q9FI56 (/IMP) |
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
2 | Q9FI56 (/IDA) Q9FI56 (/IDA) |
Regulation of chlorophyll biosynthetic process GO:0010380
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.
|
2 | Q9FI56 (/IMP) Q9FI56 (/IMP) |
Protein targeting to chloroplast GO:0045036
The process of directing proteins towards the chloroplast, usually using signals contained within the protein. Imported proteins are synthesized as cytosolic precursors containing N-terminal uptake-targeting sequences that direct each protein to its correct subcompartment and are subsequently cleaved.
|
2 | Q9FI56 (/IMP) Q9FI56 (/IMP) |
Protein import into chloroplast stroma GO:0045037
The targeting and import of proteins into the chloroplast stroma. Import depends on ATP hydrolysis catalyzed by stromal chaperones. Chloroplast stromal proteins, such as the S subunit of rubisco, have a N-terminal stromal-import sequence of about 44 amino acids which is cleaved from the protein precursor after import.
|
2 | Q9FI56 (/IMP) Q9FI56 (/IMP) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
1 | Q9SXJ7 (/ISS) |
Cellular response to heat GO:0034605
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
1 | Q6H795 (/IMP) |
Protein import into chloroplast stroma GO:0045037
The targeting and import of proteins into the chloroplast stroma. Import depends on ATP hydrolysis catalyzed by stromal chaperones. Chloroplast stromal proteins, such as the S subunit of rubisco, have a N-terminal stromal-import sequence of about 44 amino acids which is cleaved from the protein precursor after import.
|
1 | Q9SXJ7 (/ISS) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q8DVD0 (/IMP) |
Cell motility GO:0048870
Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another.
|
1 | Q1D2Y0 (/IMP) |
Supramolecular fiber organization GO:0097435
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.
|
1 | Q1D2Y0 (/IMP) |
Positive regulation of response to salt stress GO:1901002
Any process that activates or increases the frequency, rate or extent of response to salt stress.
|
1 | Q6H795 (/IMP) |
Positive regulation of response to water deprivation GO:1902584
Any process that activates or increases the frequency, rate or extent of response to water deprivation.
|
1 | Q6H795 (/IMP) |
There are 15 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
124 |
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
P0ABH9 (/IDA)
(114 more) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
9 | P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
9 | P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
9 | P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) P9WPC9 (/HDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
5 | P42762 (/IDA) P42762 (/IDA) Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
5 | P42762 (/IDA) P42762 (/IDA) Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
|
5 | P42762 (/IDA) P42762 (/IDA) Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
3 | Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Plastid stroma GO:0009532
The proteinaceous ground substance of plastids.
|
3 | Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Plastid GO:0009536
Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
|
3 | Q9FI56 (/IDA) Q9FI56 (/IDA) Q9SXJ7 (/IDA) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
2 | Q9FI56 (/IDA) Q9FI56 (/IDA) |
Chloroplast thylakoid membrane GO:0009535
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
|
2 | Q9FI56 (/IDA) Q9FI56 (/IDA) |
Chloroplast inner membrane GO:0009706
The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.
|
2 | Q9FI56 (/IDA) Q9FI56 (/IDA) |
Tic complex GO:0031897
The translocon of the inner envelope of chloroplasts, which facilitates the import of proteins across the chloroplast inner membrane.
|
2 | Q9FI56 (/TAS) Q9FI56 (/TAS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
1 | Q9SXJ7 (/IDA) |