The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"High mobility group box domain
".
FunFam 12: axial regulator YABBY 5-like
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
7 | O22152 (/ISS) O22152 (/ISS) O22152 (/ISS) Q8GW46 (/ISS) Q8GW46 (/ISS) Q9XFB1 (/ISS) Q9XFB1 (/ISS) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
7 | O22152 (/IPI) O22152 (/IPI) O22152 (/IPI) Q8GW46 (/IPI) Q8GW46 (/IPI) Q9XFB1 (/IPI) Q9XFB1 (/IPI) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Polarity specification of adaxial/abaxial axis GO:0009944
The process resulting in the establishment of polarity along the adaxial/abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
|
7 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) Q8GW46 (/IMP) Q8GW46 (/IMP) Q9XFB1 (/IMP) Q9XFB1 (/IMP) |
|
Regulation of shoot apical meristem development GO:1902183
Any process that modulates the frequency, rate or extent of shoot apical meristem development.
|
7 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) Q8GW46 (/IMP) Q8GW46 (/IMP) Q9XFB1 (/IMP) Q9XFB1 (/IMP) |
|
Regulation of leaf development GO:2000024
Any process that modulates the frequency, rate or extent of leaf development.
|
7 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) Q8GW46 (/IMP) Q8GW46 (/IMP) Q9XFB1 (/IMP) Q9XFB1 (/IMP) |
|
Fruit development GO:0010154
The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.
|
5 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) Q9XFB1 (/IMP) Q9XFB1 (/IMP) |
|
Abaxial cell fate specification GO:0010158
The process in which a cell becomes capable of differentiating autonomously into an abaxial cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
|
5 | O22152 (/IGI) O22152 (/IGI) O22152 (/IGI) Q9XFB1 (/IGI) Q9XFB1 (/IGI) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
4 | Q8GW46 (/TAS) Q8GW46 (/TAS) Q9XFB1 (/TAS) Q9XFB1 (/TAS) |
|
Specification of floral organ number GO:0048833
Any process that modulates the number of floral organs formed in a floral whorl.
|
4 | Q7XIM7 (/IMP) Q7XIM7 (/IMP) Q7XIM7 (/IMP) Q7XIM7 (/IMP) |
|
Regulation of flower development GO:0009909
Any process that modulates the frequency, rate or extent of flower development.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
|
Meristem structural organization GO:0009933
Organization of a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation, thereby effecting growth and development of a plant by giving rise to more meristem or specialized tissue.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
|
Specification of floral organ identity GO:0010093
The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
|
Inflorescence meristem growth GO:0010450
The increase in size or mass of an inflorescence meristem, a population of undifferentiated cells in a plant shoot which produces small leaves and then floral meristems, which will give rise to flowers.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
|
Cell fate commitment GO:0045165
The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
|
Specification of plant organ position GO:0090706
The regionalization process in which information that determines the correct position at which plant organ primordia are formed is generated and perceived resulting in correct positioning of the new plant organ.
|
3 | O22152 (/IMP) O22152 (/IMP) O22152 (/IMP) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | Q7XIM7 (/IDA) Q7XIM7 (/IDA) Q7XIM7 (/IDA) Q7XIM7 (/IDA) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | O22152 (/TAS) O22152 (/TAS) O22152 (/TAS) |