The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
ATP synthase, gamma subunit, helix hairpin domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: ATP synthase gamma chain

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
164 P05631 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI) P0ABA6 (/IPI)
(154 more)
Proton-transporting ATP synthase activity, rotational mechanism GO:0046933
Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
163 P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA)
(153 more)
Proton-transporting ATPase activity, rotational mechanism GO:0046961
Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
163 P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA) P0ABA6 (/IDA)
(153 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
4 P36542 (/HDA) P36542 (/HDA) P36542 (/HDA) P36542 (/HDA)
Transmembrane transporter activity GO:0022857
Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
4 P36542 (/IC) P36542 (/IC) P36542 (/IC) P36542 (/IC)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
1 Q96250 (/IDA)

There are 13 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
ATP synthesis coupled proton transport GO:0015986
The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
10 O01666 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS)
Proton transmembrane transport GO:1902600
The directed movement of a proton across a membrane.
10 O01666 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS)
Oxidative phosphorylation GO:0006119
The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.
5 P35435 (/NAS) P36542 (/NAS) P36542 (/NAS) P36542 (/NAS) P36542 (/NAS)
ATP biosynthetic process GO:0006754
The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
4 P36542 (/NAS) P36542 (/NAS) P36542 (/NAS) P36542 (/NAS)
ATP biosynthetic process GO:0006754
The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
4 P36542 (/TAS) P36542 (/TAS) P36542 (/TAS) P36542 (/TAS)
Cristae formation GO:0042407
The assembly of cristae, the inwards folds of the inner mitochondrial membrane.
4 P36542 (/TAS) P36542 (/TAS) P36542 (/TAS) P36542 (/TAS)
Mitochondrial ATP synthesis coupled proton transport GO:0042776
The transport of protons across a mitochondrial membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
4 P36542 (/IC) P36542 (/IC) P36542 (/IC) P36542 (/IC)
Mitochondrial ATP synthesis coupled proton transport GO:0042776
The transport of protons across a mitochondrial membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
4 P36542 (/TAS) P36542 (/TAS) P36542 (/TAS) P36542 (/TAS)
ATP metabolic process GO:0046034
The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.
2 Q91VR2 (/ISO) Q91VR2 (/ISO)
Generation of precursor metabolites and energy GO:0006091
The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
1 C8VUK2 (/RCA)
Mitochondrial ATP synthesis coupled proton transport GO:0042776
The transport of protons across a mitochondrial membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
1 O74754 (/ISS)
ATP metabolic process GO:0046034
The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.
1 P35435 (/IDA)
Cellular response to nitric oxide GO:0071732
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.
1 P35435 (/IEP)

There are 33 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
167 P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA) P0ABA6 (/HDA)
(157 more)
Proton-transporting ATP synthase complex, catalytic core F(1) GO:0045261
The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
163 P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP) P0ABA6 (/IMP)
(153 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
13 A0A1D8PRY3 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA) A1KI97 (/IDA)
(3 more)
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
12 P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA)
(2 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
12 P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA) P9WPU9 (/HDA)
(2 more)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
10 Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q8I6T7 (/IDA) Q96250 (/IDA)
Mitochondrial proton-transporting ATP synthase, catalytic core GO:0005754
The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.
9 Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS) Q8I6T7 (/ISS)
Mitochondrial proton-transporting ATP synthase complex GO:0005753
A proton-transporting ATP synthase complex found in the mitochondrial membrane.
7 P05631 (/IDA) P35435 (/IDA) P36542 (/IDA) P36542 (/IDA) P36542 (/IDA) P36542 (/IDA) Q96250 (/IDA)
Mitochondrial proton-transporting ATP synthase complex GO:0005753
A proton-transporting ATP synthase complex found in the mitochondrial membrane.
5 Q4R5B0 (/ISS) Q5RBS9 (/ISS) Q5RBS9 (/ISS) Q91VR2 (/ISS) Q91VR2 (/ISS)
Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) GO:0000275
The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.
4 P36542 (/NAS) P36542 (/NAS) P36542 (/NAS) P36542 (/NAS)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
4 O01666 (/HDA) O74754 (/HDA) Q91VR2 (/HDA) Q91VR2 (/HDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
4 P36542 (/ISS) P36542 (/ISS) P36542 (/ISS) P36542 (/ISS)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
4 P36542 (/NAS) P36542 (/NAS) P36542 (/NAS) P36542 (/NAS)
Mitochondrial inner membrane GO:0005743
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
4 P36542 (/ISS) P36542 (/ISS) P36542 (/ISS) P36542 (/ISS)
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
4 P36542 (/TAS) P36542 (/TAS) P36542 (/TAS) P36542 (/TAS)
Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) GO:0000275
The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.
2 Q91VR2 (/ISO) Q91VR2 (/ISO)
Mitochondrial inner membrane GO:0005743
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
2 Q91VR2 (/HDA) Q91VR2 (/HDA)
Mitochondrial inner membrane GO:0005743
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
2 Q91VR2 (/ISO) Q91VR2 (/ISO)
Mitochondrial proton-transporting ATP synthase complex GO:0005753
A proton-transporting ATP synthase complex found in the mitochondrial membrane.
2 Q91VR2 (/ISO) Q91VR2 (/ISO)
Mitochondrial proton-transporting ATP synthase, central stalk GO:0005756
One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; rotates within the catalytic core during catalysis.
2 O74754 (/ISS) Q54DF1 (/ISS)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
2 Q91VR2 (/HDA) Q91VR2 (/HDA)
Proton-transporting ATP synthase complex, catalytic core F(1) GO:0045261
The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
2 Q91VR2 (/ISO) Q91VR2 (/ISO)
Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) GO:0000275
The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.
1 P35435 (/IDA)
Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) GO:0000275
The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.
1 O01666 (/ISS)
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
1 Q96250 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q96250 (/IDA)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q96250 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q96250 (/IDA)
Mitochondrial envelope GO:0005740
The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.
1 P35435 (/NAS)
Mitochondrial inner membrane GO:0005743
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
1 P35435 (/IDA)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
1 Q96250 (/IDA)
Proton-transporting ATP synthase complex, catalytic core F(1) GO:0045261
The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
1 P35435 (/IDA)
Phagocytic vesicle GO:0045335
A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
1 Q54DF1 (/HDA)
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