The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"SWIB/MDM2 domain
".
FunFam 1: SWI/SNF-related matrix-associated regulator of chr...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 19 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
53 |
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
(43 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
42 |
Q61466 (/IPI)
Q6P9Z1 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q92925 (/IPI)
Q96GM5 (/IPI)
(32 more) |
Molecular adaptor activity GO:0060090
The binding activity of a molecule that brings together two or more molecules through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
|
31 |
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
(21 more) |
Signaling receptor binding GO:0005102
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
|
17 |
D3ZBS9 (/IPI)
D3ZBS9 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
(7 more) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
16 |
Q5U3Y2 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
(6 more) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
15 |
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
Q6STE5 (/IPI)
(5 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
3 | D3ZBS9 (/IDA) D3ZBS9 (/IDA) Q5U3Y2 (/IDA) |
RNA polymerase II transcription factor binding GO:0001085
Interacting selectively and non-covalently with an RNA polymerase II transcription factor, any protein required to initiate or regulate transcription by RNA polymerase II.
|
2 | Q9VYG2 (/IPI) Q9VYG2 (/IPI) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
2 | Q9VYG2 (/IDA) Q9VYG2 (/IDA) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | Q61466 (/ISO) Q6P9Z1 (/ISO) |
Signaling receptor binding GO:0005102
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
|
2 | Q61466 (/ISO) Q6P9Z1 (/ISO) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
2 | Q9VYG2 (/ISS) Q9VYG2 (/ISS) |
Myosin binding GO:0017022
Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
|
2 | Q9VYG2 (/IPI) Q9VYG2 (/IPI) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
2 | Q9VYG2 (/IPI) Q9VYG2 (/IPI) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
1 | Q6P9Z1 (/ISO) |
Nuclear receptor binding GO:0016922
Interacting selectively and non-covalently, in a ligand dependent manner, with a nuclear receptor protein.
|
1 | Q6P9Z1 (/ISO) |
Nuclear receptor transcription coactivator activity GO:0030374
The function of a transcription cofactor that activates transcription in conjuction with a ligand-dependent nuclear receptor from a RNA polymerase II promoter; does not bind DNA itself.
|
1 | Q6P9Z1 (/ISO) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
1 | Q6P9Z1 (/ISO) |
Molecular adaptor activity GO:0060090
The binding activity of a molecule that brings together two or more molecules through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
|
1 | Q61466 (/ISO) |
There are 41 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleosome disassembly GO:0006337
The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
|
53 |
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(43 more) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
53 |
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(43 more) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
53 |
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
(43 more) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
31 |
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
(21 more) |
Chromatin-mediated maintenance of transcription GO:0048096
Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable.
|
31 |
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
Q96GM5 (/IMP)
(21 more) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
18 |
Q6P9Z1 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(8 more) |
Neural retina development GO:0003407
The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.
|
16 |
Q6P9Z1 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
Q6STE5 (/IEP)
(6 more) |
Positive regulation of neuroblast proliferation GO:0002052
Any process that activates or increases the rate of neuroblast proliferation.
|
15 |
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(5 more) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
15 |
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
Q6STE5 (/IC)
(5 more) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
15 |
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(5 more) |
Regulation of lipid metabolic process GO:0019216
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.
|
15 |
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
(5 more) |
ATP-dependent chromatin remodeling GO:0043044
Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors.
|
7 | Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) |
Heart morphogenesis GO:0003007
The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
3 | A0A1L1QZS5 (/IGI) B2KL77 (/IGI) F6NVB1 (/IGI) |
Nucleosome disassembly GO:0006337
The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
|
3 | Q61466 (/ISO) Q6P9Z1 (/ISO) Q99JR8 (/ISO) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
3 | Q61466 (/ISO) Q6P9Z1 (/ISO) Q99JR8 (/ISO) |
Determination of left/right symmetry GO:0007368
The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.
|
3 | A0A1L1QZS5 (/IMP) B2KL77 (/IMP) F6NVB1 (/IMP) |
Cardiac muscle cell differentiation GO:0055007
The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
|
3 | A0A1L1QZS5 (/IGI) B2KL77 (/IGI) F6NVB1 (/IGI) |
Hematopoietic progenitor cell differentiation GO:0002244
The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells.
|
2 | E7EYW7 (/IMP) Q802C8 (/IMP) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
2 | Q9VYG2 (/IMP) Q9VYG2 (/IMP) |
Negative regulation of neuroblast proliferation GO:0007406
Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.
|
2 | Q9VYG2 (/IMP) Q9VYG2 (/IMP) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q9VYG2 (/IGI) Q9VYG2 (/IGI) |
Positive regulation of heterochromatin assembly GO:0031453
Any process that activates or increases the frequency, rate or extent of heterochromatin formation.
|
2 | Q9VYG2 (/IMP) Q9VYG2 (/IMP) |
Cellular response to fatty acid GO:0071398
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.
|
2 | D3ZBS9 (/IEP) D3ZBS9 (/IEP) |
Positive regulation of neuroblast proliferation GO:0002052
Any process that activates or increases the rate of neuroblast proliferation.
|
1 | Q6P9Z1 (/ISO) |
Heart morphogenesis GO:0003007
The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
1 | Q6P9Z1 (/IMP) |
Secondary heart field specification GO:0003139
The process that results in the delineation of a specific region of the lateral mesoderm into the area which will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract).
|
1 | Q6P9Z1 (/IMP) |
Cardiac right ventricle formation GO:0003219
The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts.
|
1 | Q6P9Z1 (/IMP) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
1 | Q6P9Z1 (/ISO) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q6P9Z1 (/ISO) |
Positive regulation of G2/M transition of mitotic cell cycle GO:0010971
Any signalling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.
|
1 | Q5U3Y2 (/IMP) |
Positive regulation of G2/M transition of mitotic cell cycle GO:0010971
Any signalling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.
|
1 | Q6P9Z1 (/ISO) |
Spinal cord development GO:0021510
The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues.
|
1 | Q802C8 (/IMP) |
Neutrophil differentiation GO:0030223
The process in which a myeloid precursor cell acquires the specialized features of a neutrophil.
|
1 | E7EYW7 (/IMP) |
Muscle cell differentiation GO:0042692
The process in which a relatively unspecialized cell acquires specialized features of a muscle cell.
|
1 | Q6P9Z1 (/IMP) |
Regulation of protein binding GO:0043393
Any process that modulates the frequency, rate or extent of protein binding.
|
1 | Q6P9Z1 (/IDA) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q6P9Z1 (/ISO) |
Chromatin-mediated maintenance of transcription GO:0048096
Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable.
|
1 | Q61466 (/ISO) |
Positive regulation of smooth muscle cell differentiation GO:0051152
Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation.
|
1 | Q5U3Y2 (/IDA) |
Positive regulation of smooth muscle cell differentiation GO:0051152
Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation.
|
1 | Q6P9Z1 (/ISO) |
Definitive hemopoiesis GO:0060216
A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood.
|
1 | Q802C8 (/IMP) |
Somite development GO:0061053
The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.
|
1 | Q802C8 (/IMP) |
There are 23 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
59 |
B9EGA3 (/IDA)
B9EGA3 (/IDA)
F8VUB0 (/IDA)
J3KMX2 (/IDA)
J3KMX2 (/IDA)
J3KMX2 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(49 more) |
SWI/SNF complex GO:0016514
A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.
|
55 |
Q61466 (/IDA)
Q6P9Z1 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(45 more) |
NpBAF complex GO:0071564
A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.
|
47 |
Q2TBN1 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
(37 more) |
NBAF complex GO:0071565
A SWI/SNF-type complex that is found in post-mitotic neurons, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, DPF1/BAF45B, DPF3/BAF45C, ACTL6B/BAF53B genes. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.
|
47 |
Q2TBN1 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
Q6STE5 (/ISS)
(37 more) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
32 |
F8VUB0 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
Q96GM5 (/IDA)
(22 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
31 |
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
A0A090N8Z9 (/IDA)
(21 more) |
NpBAF complex GO:0071564
A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.
|
17 |
Q61466 (/IDA)
Q6P9Z1 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(7 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
15 |
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
Q6STE5 (/IDA)
(5 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
15 |
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
Q6STE5 (/TAS)
(5 more) |
SWI/SNF complex GO:0016514
A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.
|
15 |
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
Q6STE5 (/NAS)
(5 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
7 | Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
7 | Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) Q92925 (/HDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
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3 | Q61466 (/ISO) Q6P9Z1 (/ISO) Q99JR8 (/ISO) |
SWI/SNF complex GO:0016514
A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.
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3 | Q61466 (/ISO) Q6P9Z1 (/ISO) Q99JR8 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
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2 | Q61466 (/ISO) Q6P9Z1 (/ISO) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
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2 | Q9VYG2 (/IDA) Q9VYG2 (/IDA) |
RSC-type complex GO:0016586
A SWI/SNF-type complex that contains a bromodomain containing-protein, such as yeast Rsc1 or Rsc4 or mammalian PB1/BAF180. The RSC complex is generally recruited to RNA polymerase III promoters and is specifically recruited to RNA polymerase II promoters by transcriptional activators and repressors; it is also involved in non-homologous end joining
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2 | Q9VYG2 (/IDA) Q9VYG2 (/IDA) |
Brahma complex GO:0035060
A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the Drosophila brm (brahma) or mammalian SMARCA2/BAF190B/BRM gene, or an ortholog thereof.
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2 | Q9VYG2 (/IDA) Q9VYG2 (/IDA) |
NBAF complex GO:0071565
A SWI/SNF-type complex that is found in post-mitotic neurons, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, DPF1/BAF45B, DPF3/BAF45C, ACTL6B/BAF53B genes. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.
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2 | Q61466 (/IDA) Q6P9Z1 (/IDA) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
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1 | Q6P9Z1 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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1 | Q6P9Z1 (/ISO) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
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1 | Q61466 (/ISO) |
NpBAF complex GO:0071564
A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.
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1 | Q6P9Z1 (/ISO) |