CATH Superfamily 1.10.20.10

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	Histone H3	3000		-	-	95.5
2	Histone H4	1458	3D	5ja4B00	-	94.1
3	Histone H2B	1405	3D	3w97H00	-	96.5
4	Histone H2A	1328	3D	5z23C00	-	80.4
5	Histone H2A	1028	3D	5z30G00	-	92.0
6	Nuclear transcription factor Y subunit gamma	891	3D	4csrB00	-	95.1
7	Histone H4	875	3D	4kudF00	-	83.2
8	Histone H2A	675	3D	6genF00	-	83.7
9	Histone H2A	551		-	-	73.3
10	Histone H3	541		-	-	85.2
11	Transcription initiation factor TFIID subunit 12	535	3D	1h3oD00	-	97.1
12	Histone H4	530	3D	6genD00	-	97.0
16	Histone H2B	499	3D	4khaA03	-	92.2
13	Core histone macro-H2A	495	3D	2f8nG00	-	88.2
14	Histone H2B	485	3D	4wnnH00	-	78.7
15	Transcription initiation factor TFIID subunit 4B	447	3D	1h3oC00	-	100.0
17	Ccaat-binding factor complex subunit	431	3D	4g92C00	-	75.0
18	Transcription initiation factor TFIID subunit 9	407	3D	1tafA00	-	98.5
19	Negative cofactor 2 beta	386	3D	1jfiB00	-	98.0
85	Histone H3.2	383	3D	6ir9e00	-	75.2
20	Histone H2A	373		-	-	70.9
21	Histone H2A	333		-	-	71.0
22	Histone H2A	298		-	-	86.7
23	transcription initiation protein SPT3 homolog	288		-	-	99.2
24	Histone H3	279		-	-	88.3
25	Transcription initiation factor TFIID subunit 11	256	3D	1bh9B00	-	92.1
103	Histone H2A type 1	251	3D	6o1dG00	-	65.1
26	Histone H2A	244		-	-	80.0
27	Nuclear transcription factor Y subunit beta	240	3D	4csrA00	-	68.2
28	Transcription initiation factor TFIID subunit 13	235	3D	1bh9A00	-	95.3
29	son of sevenless homolog 1 isoform X1	227	3D	3ksyA01	-	73.1
30	Transcription initiation factor TFIID subunit 6	189	3D	1tafB00	-	93.1
31	transcription initiation factor TFIID subunit 8 isoform X2	188	3D	4wv4B00	-	35.4
32	dr1-associated corepressor isoform X1	177	3D	1jfiA00	-	74.4
33	Transcription initiation factor TFIID complex subunit	175		-	-	95.9
34	STAGA complex 65 subunit gamma	160		-	-	96.5
35	Nuclear transcription factor Y subunit B-3	157		-	-	77.9
36	CBF/NF-Y family transcription factor	146		-	-	80.2
37	Transcription initiation factor TFIID subunit 12	138		-	-	78.4
38	dr1-associated corepressor homolog	122		-	-	62.0
44	Histone H3.3	112	3D	5ja4A00	-	58.6
39	Nuclear transcription Y subunit beta	110		-	-	46.0
40	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	109		-	-	89.9
76	Histone H4	104	3D	6ir9f00	-	53.1
41	DNA polymerase epsilon subunit 3	104		-	-	88.1
42	Transcription initiation factor TFIID subunit 13	101		-	-	61.9
43	Histone H2B	99		-	-	92.4
45	Histone H2B	88		-	-	67.7
46	transcription initiation factor TFIID subunit 6	82		-	-	68.1
47	Histone H3	77	3D	1kx5E00	-	45.1
48	Chromatin accessibility complex subunit 1	73		-	-	93.9
49	Nuclear transcription factor Y subunit B-6	73	3D	5g49A00	-	84.4
53	Centromere protein W	72	3D	3vh6W00	-	75.3
63	Centromere protein S	72	3D	4ne6C00	-	79.6
51	DNA polymerase epsilon 4, accessory subunit	70		-	-	75.0
50	centromere protein T isoform X2	70		-	-	52.1
52	Histone H2A	69		-	-	25.8
54	Putative histone H1.5-like	66		-	-	85.2
55	Transcription initiation factor TFIID subunit 11	62		-	-	77.7
56	Transcription initiation factor TFIID subunit 3	62		-	-	40.0
57	ankyrin repeat and BTB/POZ domain-containing protein 2	59		-	-	73.0
58	Histone H4	58		-	-	53.5
59	Transcription initiation factor TFIID subunit beta	57		-	-	76.2
65	Histone H3-like centromeric protein A	53	3D	6o1dE00	-	71.8
60	BTB domain containing 11	50		-	-	49.1
61	TFIID subunit	45		-	-	93.5
62	Nuclear transcription factor Y subunit C	45		-	-	98.5
64	Transcription initiation factor TFIID subunit 9	41		-	-	77.5
66	H2B histone family member W testis-specific	40		-	-	89.1
67	Transcription initiation factor TFIID subunit 13	37		-	-	72.9
68	Nuclear factor Y transcription factor	36		-	-	73.7
71	Transcription factor TFIID complex subunit	33		-	-	90.3
69	Transcription initiation factor TFIID subunit	33		-	-	82.8
70	Nuclear transcription factor Y subunit C-3	33		-	-	59.8
72	Transcriptional activator spt7	32		-	-	88.3
73	Histone H4	31		-	-	45.5
74	dr1-associated corepressor	29		-	-	46.0
78	Histone H3	28		-	-	44.5
77	Histone H3 variant	28		-	-	85.6
75	WGS project CABT00000000 data, contig 2.56	28		-	-	95.4
79	Transcription initiation factor TFIID subunit 6, putative	27		-	-	22.1
80	transcription initiation factor TFIID subunit 11 isoform X2	26		-	-	26.9
82	Transcriptional activator, variant	25		-	-	54.6
83	nuclear transcription factor Y subunit gamma isoform X4	25		-	-	46.0
81	Histone H3, putative	25		-	-	45.3
87	Probable histone 3	23		-	-	78.5
84	Histone H2B	23		-	-	33.8
86	Histone H2A	23		-	-	93.1
89	Histone H2A	22		-	-	66.9
88	Histone H3-like centromeric protein CSE4	22		-	-	91.8
91	Histone H2A	21		-	-	31.2
90	DNA polymerase epsilon subunit 3	21		-	-	79.4
92	Protein MHF1-like isoform A	20		-	-	74.2
93	Histone H2A	20		-	-	92.1
94	CCAAT-binding transcription factor, putative	19		-	-	5.8
96	Histone H3	18		-	-	91.2
97	Histone H2A	18	3D	6a7uA00	-	56.9
95	Histone H2A	18		-	-	92.2
115	Histone H4	17	3D	1p3oB00	-	42.7
101	Transcriptional activator SPT7	16		-	-	64.4
98	Apoptosis-inducing TAF9-like domain 1 family protein, putative	16		-	-	56.9
102	Histone H3-like centromeric protein CSE4	16		-	-	86.9
100	Transcription initiation factor TFIID subunit 9B	16		-	-	16.8
99	nuclear transcription factor Y subunit beta	16		-	-	80.2
105	Inner kinetochore subunit cnp20	15		-	-	78.5
104	Transcription initiation factor TFIID subunit 6	15		-	-	76.7
106	Centromeric histone 3	15		-	-	76.0
185	DNA-binding protein HMf-2	15	3D	5t5kF00	-	17.4
107	Chromatin accessibility complex subunit 1	14		-	-	22.1
110	Nuclear factor Y, subunit B1	14		-	-	66.2
108	High mobility group protein B4, putative	14		-	-	87.1
111	Histone H3	14		-	-	51.9
109	Nuclear factor Y subunit C10	14		-	-	91.4
112	Transcription initiation factor TFIID subunit 12	13		-	-	17.8
128	Chromatin accessibility complex 14kD protein	13	3D	2bymD00	-	87.2
113	Transcription initiation factor TFIID subunit 13	13		-	-	24.2
114	Taf3p	13		-	-	20.6
116	Transcription initiation factor TFIID subunit 8	12		-	-	10.7
119	Unplaced genomic scaffold supercont1.244, whole genome shotgun sequence	11		-	-	3.5
117	Nuclear factor Y, subunit C13	11		-	-	62.5
118	Unplaced genomic scaffold supercont1.188, whole genome shotgun sequence	11		-	-	5.1
120	Unplaced genomic scaffold supercont1.12, whole genome shotgun sequence	11		-	-	3.3
126	Histone H2A	11	3D	5chlB00	-	62.1
121	DNA polymerase II third subunit	11		-	-	13.0
127	Bip2 protein	10		-	-	13.6
122	CCAAT-HAP5 transcription factor	10		-	-	89.2
125	Transcription initiation factor TFIID subunit 9	10		-	-	10.8
129	Transcription factor TFIID complex subunit Taf13	10		-	-	50.8
124	CCAAT-HAP3 transcription factor	10		-	-	61.2
123	TAF TBP-associated transcription factor	10		-	-	58.5
136	Histone H2B	9		-	-	31.7
130	Nuclear transcription factor Y subunit B-4	9		-	-	55.3
132	CBF/NF-Y family transcription factor, putative	9		-	-	53.0
135	Transcription initiation factor TFIID subunit 11	9		-	-	4.1
131	Histone H2B	9		-	-	76.2
133	Dls1p	9		-	-	0.0
134	CCAAT-box DNA binding protein subunit B	9		-	-	1.5
144	Conserved protein	8		-	-	2.7
138	TAF TBP-associated transcription factor	8		-	-	49.2
137	DNA polymerase epsilon p12 subunit	8		-	-	75.3
142	DNA polymerase epsilon subunit D	8		-	-	2.7
140	Histone H3-like centromeric protein cse-4	8		-	-	51.8
139	AaceriACL158Wp	8		-	-	87.0
145	Chromatin accessibility complex protein 1-like Protein	8		-	-	77.5
143	Uncharacterized protein	8		-	-	20.2
141	Inner kinetochore subunit MHF2	8		-	-	1.5
146	Histone H2A	8		-	-	45.1
153	histone H3-like centromeric protein A isoform X2	7		-	-	36.5
151	Uncharacterized protein	7		-	-	2.4
155	H2A histone family member Y	7		-	-	19.1
154	Transcription initiation factor tfiid, putative	7		-	-	3.6
147	Histone H3, putative	7		-	-	0.0
149	CBF/NF-Y transcription factor domain containing protein	7		-	-	3.1
156	Centromere protein S	7		-	-	87.4
152	CBF/NF-Y transcription factor family protein	7		-	-	1.4
150	DR1 One	7		-	-	22.1
148	Os07g0612500 protein	7		-	-	10.2
157	Histone H3-like centromeric protein A	7		-	-	53.8
160	Transcription initiation factor TFIID subunit, putative	6		-	-	11.9
163	Histone H3, putative	6		-	-	2.4
158	Histone-like_transcription_factor_ CBF/NF-Y	6		-	-	77.7
161	Histone H3	6		-	-	5.4
159	CBF/NF-Y family transcription factor, putative	6		-	-	28.7
162	CBF/NF-Y transcription factor domain containing protein	6		-	-	6.0
164	Uncharacterized protein	6		-	-	18.3
177	Histone H3	5		-	-	13.1
170	Histone H2A	5		-	-	31.6
167	Histone H2A	5		-	-	24.9
175	Uncharacterized protein	5		-	-	7.1
165	Histone H2A	5		-	-	74.5
173	Histone H2A	5		-	-	43.1
168	Nuclear transcription factor Y subunit beta	5		-	-	33.0
178	Histone H2B	5		-	-	2.2
171	Histone H2B	5		-	-	21.6
176	Histone H2B	5		-	-	6.2
174	MIP14426p	5		-	-	20.7
169	Histone H4	5		-	-	21.1
172	Histone H2A	5		-	-	39.6
179	Transcriptional activator hap3	5		-	-	12.4
166	TAF TBP-associated transcription factor	5		-	-	87.9
180	Centromere protein W	4		-	-	40.1
189	Uncharacterized protein	4		-	-	6.6
191		4		-	-	78.3
187	Uncharacterized protein	4		-	-	4.8
182	DRAP1 corepressor homolog	4		-	-	19.4
184		4		-	-	19.3
181		4		-	-	44.3
186	CCAAT-binding factor complex subunit Php3	4		-	-	40.2
188	DNA polymerase epsilon subunit C, putative	4		-	-	4.1
183	YALI0F17072p	4		-	-	35.1
190	Histone H2A	4		-	-	72.1
193		3		-	-	32.2
205		3		-	-	9.9
207		3		-	-	0.0
198		3		-	-	0.0
202		3		-	-	11.9
196		3		-	-	22.6
206		3		-	-	7.2
194		3		-	-	13.1
200		3		-	-	3.1
197		3		-	-	11.4
192		3		-	-	17.9
199		3		-	-	0.9
195		3		-	-	38.8
201		3		-	-	0.0
203		3		-	-	7.5
204		3		-	-	7.2
211		2		-	-	37.7
236		2		-	-	3.9
218		2		-	-	25.9
234		2		-	-	0.0
246		2		-	-	2.6
221		2		-	-	33.7
260		2		-	-	0.0
262		2		-	-	33.4
212		2		-	-	42.3
227		2		-	-	10.1
264		2		-	-	28.1
255		2		-	-	0.0
232		2		-	-	4.9
225		2		-	-	8.9
250		2		-	-	0.0
257		2		-	-	0.0
259		2		-	-	0.0
249		2		-	-	6.3
240		2		-	-	0.0
230		2		-	-	0.0
214		2		-	-	20.8
229		2		-	-	0.0
222		2		-	-	37.1
217		2		-	-	28.7
239		2		-	-	0.0
269		2		-	-	49.4
247		2		-	-	0.0
209		2		-	-	41.4
210		2		-	-	8.7
252		2		-	-	46.8
219		2		-	-	32.7
242		2		-	-	0.0
220		2		-	-	31.8
226		2		-	-	0.0
244		2		-	-	0.0
237		2		-	-	0.0
254		2		-	-	0.0
235		2		-	-	2.3
213		2		-	-	42.8
265		2		-	-	31.9
224		2		-	-	0.0
251		2		-	-	44.4
256		2		-	-	0.0
263		2		-	-	30.4
215		2		-	-	20.6
245		2		-	-	3.8
267		2		-	-	40.9
233		2		-	-	1.9
208		2		-	-	11.6
241		2		-	-	1.2
266		2		-	-	41.8
243		2		-	-	6.1
231		2		-	-	0.0
261		2		-	-	27.9
228		2		-	-	12.1
268		2		-	-	43.1
223		2		-	-	0.0
238		2		-	-	0.0
253		2		-	-	0.0
216		2		-	-	21.6
258		2		-	-	10.8
248		2		-	-	0.0
325		1		-	-	0.0
378		1		-	-	0.0
350		1		-	-	0.0
337		1		-	-	0.0
340		1		-	-	0.0
311		1		-	-	0.0
285		1		-	-	0.0
288		1		-	-	0.0
308		1		-	-	0.0
373		1		-	-	0.0
301		1		-	-	0.0
366		1		-	-	0.0
272		1		-	-	0.0
287		1		-	-	0.0
294		1		-	-	0.0
349		1		-	-	0.0
333		1		-	-	0.0
323		1		-	-	0.0
359		1		-	-	0.0
330		1		-	-	0.0
360		1		-	-	0.0
274		1		-	-	0.0
353		1		-	-	0.0
375		1		-	-	0.0
303		1		-	-	0.0
278		1		-	-	0.0
276		1		-	-	0.0
347		1		-	-	0.0
320		1		-	-	0.0
361		1		-	-	0.0
307		1		-	-	0.0
326		1		-	-	0.0
335		1		-	-	0.0
299		1		-	-	0.0
377		1		-	-	0.0
315		1		-	-	0.0
338		1		-	-	0.0
305		1		-	-	0.0
328		1		-	-	0.0
281		1		-	-	0.0
363		1		-	-	0.0
317		1		-	-	0.0
313		1		-	-	0.0
284		1		-	-	0.0
289		1		-	-	0.0
319		1		-	-	0.0
344		1		-	-	0.0
357		1		-	-	0.0
336		1		-	-	0.0
297		1		-	-	0.0
290		1		-	-	0.0
365		1		-	-	0.0
283		1		-	-	0.0
271		1		-	-	0.0
331		1		-	-	0.0
358		1		-	-	0.0
348		1		-	-	0.0
364		1		-	-	0.0
367		1		-	-	0.0
324		1		-	-	0.0
351		1		-	-	0.0
379		1		-	-	0.0
342		1		-	-	0.0
295		1		-	-	0.0
341		1		-	-	0.0
312		1		-	-	0.0
370		1		-	-	0.0
309		1		-	-	0.0
380		1		-	-	0.0
300		1		-	-	0.0
286		1		-	-	0.0
296		1		-	-	0.0
329		1		-	-	0.0
275		1		-	-	0.0
346		1		-	-	0.0
352		1		-	-	0.0
369		1		-	-	0.0
279		1		-	-	0.0
372		1		-	-	0.0
293		1		-	-	0.0
322		1		-	-	0.0
310		1		-	-	0.0
354		1		-	-	0.0
332		1		-	-	0.0
368		1		-	-	0.0
316		1		-	-	0.0
292		1		-	-	0.0
291		1		-	-	0.0
374		1		-	-	0.0
327		1		-	-	0.0
280		1		-	-	0.0
273		1		-	-	0.0
314		1		-	-	0.0
355		1		-	-	0.0
270		1		-	-	0.0
334		1		-	-	0.0
302		1		-	-	0.0
362		1		-	-	0.0
376		1		-	-	0.0
298		1		-	-	0.0
343		1		-	-	0.0
321		1		-	-	0.0
371		1		-	-	0.0
339		1		-	-	0.0
345		1		-	-	0.0
282		1		-	-	0.0
277		1		-	-	0.0
304		1		-	-	0.0
306		1		-	-	0.0
318		1		-	-	0.0
356		1		-	-	0.0