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CATH Superfamily 1.10.1740.10

RNA polymerase sigma factor, region 2, helix turn helix motif

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 25: ECF RNA polymerase sigma factor SigM

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 0 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Response to xenobiotic stimulus GO:0009410
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms.
 7 O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP)
Response to water GO:0009415
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.
 7 O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP) O53590 (/IEP)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
 7 O53590 (/IDA) O53590 (/IDA) O53590 (/IDA) O53590 (/IDA) O53590 (/IDA) O53590 (/IDA) O53590 (/IDA)

There are 1 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
 7 O53590 (/HDA) O53590 (/HDA) O53590 (/HDA) O53590 (/HDA) O53590 (/HDA) O53590 (/HDA) O53590 (/HDA)