The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Ribonuclease III domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 4: Endoribonuclease dicer-like 1

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 11 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
11 A0A0B4LFK8 (/ISS) A1ZAW0 (/ISS) Q2Q3V4 (/ISS) Q2Q3V5 (/ISS) Q2Q3V6 (/ISS) Q2Q3V7 (/ISS) Q2Q3V8 (/ISS) Q2Q3V9 (/ISS) Q2Q3W0 (/ISS) Q2Q3W1 (/ISS)
(1 more)
Helicase activity GO:0004386
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
11 A0A0B4LFK8 (/ISS) A1ZAW0 (/ISS) Q2Q3V4 (/ISS) Q2Q3V5 (/ISS) Q2Q3V6 (/ISS) Q2Q3V7 (/ISS) Q2Q3V8 (/ISS) Q2Q3V9 (/ISS) Q2Q3W0 (/ISS) Q2Q3W1 (/ISS)
(1 more)
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
11 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA) Q2Q3W1 (/IDA)
(1 more)
SiRNA binding GO:0035197
Interacting selectively and non-covalently with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.
11 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA) Q2Q3W1 (/IDA)
(1 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
8 A1ZAW0 (/IPI) F4HQG6 (/IPI) P34529 (/IPI) P84634 (/IPI) Q3EBC8 (/IPI) Q9LXW7 (/IPI) Q9SP32 (/IPI) Q9SP32 (/IPI)
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
2 F4HQG6 (/IDA) Q9LXW7 (/IDA)
Ribonuclease III activity GO:0004525
Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.
2 A1ZAW0 (/IDA) P34529 (/IDA)
Ribonuclease III activity GO:0004525
Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.
2 P34529 (/IMP) Q9LTQ0 (/IMP)
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
1 A1ZAW0 (/IDA)
Deoxyribonuclease I activity GO:0004530
Catalysis of the endonucleolytic cleavage of DNA to 5'-phosphodinucleotide and 5'-phosphooligonucleotide end products.
1 P34529 (/IDA)
Bidentate ribonuclease III activity GO:0016443
Catalysis of the digestion of double-stranded RNAs into 20 to 30-nucleotide products. These products typically associate to the RNA-induced silencing complex and serve as guide RNAs for posttranslational RNA interference.
1 A1ZAW0 (/IMP)

There are 55 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
13 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) P34529 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP)
(3 more)
Positive regulation of defense response to virus by host GO:0002230
Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Locomotory behavior GO:0007626
The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Dosage compensation by hyperactivation of X chromosome GO:0009047
Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.
11 A0A0B4LFK8 (/IGI) A1ZAW0 (/IGI) Q2Q3V4 (/IGI) Q2Q3V5 (/IGI) Q2Q3V6 (/IGI) Q2Q3V7 (/IGI) Q2Q3V8 (/IGI) Q2Q3V9 (/IGI) Q2Q3W0 (/IGI) Q2Q3W1 (/IGI)
(1 more)
Detection of virus GO:0009597
The series of events in which a stimulus from a virus is received and converted into a molecular signal.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
11 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA) Q2Q3W1 (/IDA)
(1 more)
RNA interference GO:0016246
The process in which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and can occur through a specific decrease in the level of mRNA, or by negative regulation of translation, of both host genes and transgenes.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
11 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA) Q2Q3W1 (/IDA)
(1 more)
Production of siRNA involved in RNA interference GO:0030422
Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
11 A0A0B4LFK8 (/TAS) A1ZAW0 (/TAS) Q2Q3V4 (/TAS) Q2Q3V5 (/TAS) Q2Q3V6 (/TAS) Q2Q3V7 (/TAS) Q2Q3V8 (/TAS) Q2Q3V9 (/TAS) Q2Q3W0 (/TAS) Q2Q3W1 (/TAS)
(1 more)
Targeting of mRNA for destruction involved in RNA interference GO:0030423
The process in which small interfering RNAs target cognate mRNA molecules for degradation.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
DsRNA transport GO:0033227
The directed movement of dsRNA, double-stranded ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
SiRNA loading onto RISC involved in RNA interference GO:0035087
The transfer of small interfering RNA molecules (siRNAs) from the Dicer family of enzymes that cleave the double-stranded RNA, onto the nuclease-containing RNA-initiated silencing complex (RISC), in the context of RNA interference.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Defense response to virus GO:0051607
Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Heterochromatin organization involved in chromatin silencing GO:0070868
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin and contributes to chromatin silencing.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Cellular response to virus GO:0098586
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
11 A0A0B4LFK8 (/IMP) A1ZAW0 (/IMP) Q2Q3V4 (/IMP) Q2Q3V5 (/IMP) Q2Q3V6 (/IMP) Q2Q3V7 (/IMP) Q2Q3V8 (/IMP) Q2Q3V9 (/IMP) Q2Q3W0 (/IMP) Q2Q3W1 (/IMP)
(1 more)
Production of ta-siRNAs involved in RNA interference GO:0010267
Cleavage of double-stranded RNA to form trans-acting small interfering RNA molecules (siRNAs) of 21-23 nucleotides. ta-siRNAs arise from PolII genes and function like miRNAs to guide cleavage of target mRNAs.
4 F4HQG6 (/IMP) P84634 (/IMP) Q3EBC8 (/IMP) Q9LXW7 (/IMP)
Maintenance of DNA methylation GO:0010216
Any process involved in maintaining the methylation state of a nucleotide sequence.
3 P84634 (/IMP) Q3EBC8 (/IMP) Q9LXW7 (/IMP)
RNA virus induced gene silencing GO:0051214
Gene silencing induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or post-transcriptional gene silencing.
3 P84634 (/IGI) Q3EBC8 (/IGI) Q9LXW7 (/IGI)
Production of lsiRNA involved in RNA interference GO:0010599
Cleavage of double-stranded RNA to form lsiRNA (long small interfering RNA), a class of siRNAs 30 to 40 nt in length. lsiRNAs are induced by pathogen infection or under specific growth conditions.
2 F4HQG6 (/IMP) P84634 (/IMP)
Reproduction GO:0000003
The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms.
1 P34529 (/IMP)
DNA catabolic process, endonucleolytic GO:0000737
The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.
1 P34529 (/IDA)
Cytokinesis by cell plate formation GO:0000911
The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.
1 F4HQG6 (/IMP)
Nematode larval development GO:0002119
The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.
1 P34529 (/IMP)
Apoptotic DNA fragmentation GO:0006309
The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.
1 P34529 (/IGI)
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
1 P84634 (/IMP)
RNA processing GO:0006396
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
1 F4HQG6 (/ISS)
RNA catabolic process GO:0006401
The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
1 P34529 (/IDA)
Multicellular organism development GO:0007275
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
1 Q8LMR2 (/IMP)
Olfactory learning GO:0008355
Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.
1 P34529 (/IMP)
Virus induced gene silencing GO:0009616
Specific posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes. This silencing is triggered by viral infection, and occurs through a specific decrease in the level of mRNA of both host and viral genes.
1 P84634 (/IGI)
Virus induced gene silencing GO:0009616
Specific posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes. This silencing is triggered by viral infection, and occurs through a specific decrease in the level of mRNA of both host and viral genes.
1 F4HQG6 (/IMP)
Embryonic pattern specification GO:0009880
The process that results in the patterns of cell differentiation that will arise in an embryo.
1 F4HQG6 (/IMP)
Flower development GO:0009908
The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.
1 F4HQG6 (/TAS)
Polarity specification of adaxial/abaxial axis GO:0009944
The process resulting in the establishment of polarity along the adaxial/abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
1 A7LFZ6 (/IMP)
Vegetative phase change GO:0010050
Any process involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.
1 P84634 (/IMP)
Vegetative to reproductive phase transition of meristem GO:0010228
The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.
1 F4HQG6 (/IMP)
Production of ta-siRNAs involved in RNA interference GO:0010267
Cleavage of double-stranded RNA to form trans-acting small interfering RNA molecules (siRNAs) of 21-23 nucleotides. ta-siRNAs arise from PolII genes and function like miRNAs to guide cleavage of target mRNAs.
1 A7LFZ6 (/IDA)
Maintenance of shoot apical meristem identity GO:0010492
The process in which an organism retains a population of shoot apical meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.
1 A7LFZ6 (/IMP)
DsRNA processing GO:0031050
Cleavage of double-stranded RNA molecules by an RNaseIII-family enzyme to produce small RNAs (generally 20-30 nucleotides, depending on species) with biological function.
1 P34529 (/IDA)
Primary miRNA processing GO:0031053
Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
1 F4HQG6 (/TAS)
Pre-miRNA processing GO:0031054
Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
1 P34529 (/IMP)
Production of miRNAs involved in gene silencing by miRNA GO:0035196
Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.
1 Q8LMR2 (/IMP)
Gonad morphogenesis GO:0035262
The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals.
1 P34529 (/IMP)
MRNA cleavage involved in gene silencing by miRNA GO:0035279
The process in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.
1 F4HQG6 (/IMP)
Regulation of development, heterochronic GO:0040034
Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached.
1 P34529 (/IMP)
Positive regulation of innate immune response GO:0045089
Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.
1 A1ZAW0 (/IMP)
Positive regulation of Toll signaling pathway GO:0045752
Any process that activates or increases the frequency, rate or extent of the Tl signaling pathway.
1 A1ZAW0 (/IMP)
Seed morphogenesis GO:0048317
The process in which the anatomical structures of the seed are generated and organized.
1 F4HQG6 (/IMP)
Reproductive structure development GO:0048608
The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures.
1 A7LFZ6 (/IMP)
Defense response to virus GO:0051607
Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
1 P84634 (/IGI)
Small RNA loading onto RISC GO:0070922
The process in which a single-stranded small RNA associates with the RNA-initiated silencing complex (RISC); occurs as part of a process of gene silencing by small RNA.
1 A1ZAW0 (/IDA)
RNA phosphodiester bond hydrolysis, endonucleolytic GO:0090502
The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
1 A1ZAW0 (/IMP)
Regulation of seed maturation GO:2000034
Any process that modulates the frequency, rate or extent of seed maturation.
1 F4HQG6 (/IMP)
Positive regulation of primary miRNA processing GO:2000636
Any process that activates or increases the frequency, rate or extent of primary microRNA processing.
1 P34529 (/IMP)

There are 8 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
16 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) F4HQG6 (/IDA) P34529 (/IDA) P84634 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA)
(6 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
13 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) P34529 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA)
(3 more)
RISC complex GO:0016442
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.
11 A0A0B4LFK8 (/IDA) A1ZAW0 (/IDA) Q2Q3V4 (/IDA) Q2Q3V5 (/IDA) Q2Q3V6 (/IDA) Q2Q3V7 (/IDA) Q2Q3V8 (/IDA) Q2Q3V9 (/IDA) Q2Q3W0 (/IDA) Q2Q3W1 (/IDA)
(1 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q9LXW7 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 P34529 (/IDA)
Nuclear dicing body GO:0010445
A small round nuclear body, measuring 0.2-0.8 microns in diameter that is diffusely distributed throughout the nucleoplasm. Several proteins known to be involved in miRNA processing have been localized to these structures. D-bodies are thought to be involved in primary-miRNA processing and/or storage/assembly of miRNA processing complexes.
1 F4HQG6 (/IDA)
RISC-loading complex GO:0070578
A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.
1 A1ZAW0 (/IGI)
RISC-loading complex GO:0070578
A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.
1 A1ZAW0 (/IPI)
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