The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 68: Orthodenticle homeobox 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 25 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
21 |
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O43186 (/IPI)
O54751 (/IPI)
(11 more) |
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
15 |
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
P22810 (/IDA)
(5 more) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
13 |
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
P32242 (/IDA)
(3 more) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
13 |
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
O43186 (/ISA)
P32242 (/ISA)
(3 more) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
13 |
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
O43186 (/ISM)
P32242 (/ISM)
(3 more) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
13 |
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
O43186 (/NAS)
P32242 (/NAS)
(3 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
13 |
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
Q8SQ03 (/ISS)
(3 more) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
13 |
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
Q8SQ03 (/ISS)
(3 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
9 | O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) O43186 (/NAS) |
Leucine zipper domain binding GO:0043522
Interacting selectively and non-covalently with a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.
|
9 | O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) O43186 (/IPI) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | B5QSI6 (/IDA) O54751 (/IDA) O54751 (/IDA) Q9U2Y9 (/IDA) Q9U2Z0 (/IDA) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
4 | O54751 (/ISO) O54751 (/ISO) P80205 (/ISO) P80205 (/ISO) |
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
4 | O54751 (/ISO) O54751 (/ISO) P80205 (/ISO) P80205 (/ISO) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
3 | O54751 (/IDA) O54751 (/IDA) Q9U2Z0 (/IDA) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
3 | Q8JIZ3 (/IDA) Q9JLT8 (/IDA) Q9WTQ9 (/IDA) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
2 | O54751 (/ISO) O54751 (/ISO) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | O54751 (/IDA) O54751 (/IDA) |
Nuclear hormone receptor binding GO:0035257
Interacting selectively and non-covalently with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell.
|
2 | O54751 (/IPI) O54751 (/IPI) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | P22810 (/IPI) P22810 (/IPI) |
Leucine zipper domain binding GO:0043522
Interacting selectively and non-covalently with a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.
|
2 | O54751 (/ISO) O54751 (/ISO) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
2 | P22810 (/IPI) P22810 (/IPI) |
Double-stranded telomeric DNA binding GO:0003691
Interacting selectively and non-covalently with double-stranded telomere-associated DNA.
|
1 | Q93356 (/IDA) |
DNA binding, bending GO:0008301
The activity of binding selectively and non-covalently to and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.
|
1 | Q93356 (/IDA) |
Telomeric DNA binding GO:0042162
Interacting selectively and non-covalently with a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.
|
1 | Q93356 (/IDA) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
1 | Q6PH22 (/IPI) |
There are 78 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
17 |
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O43186 (/IDA)
O54751 (/IDA)
(7 more) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
13 |
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
Q8SQ03 (/ISS)
(3 more) |
Visual perception GO:0007601
The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
|
9 | O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) |
Animal organ morphogenesis GO:0009887
Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
|
9 | O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) O43186 (/TAS) |
Anterior/posterior pattern specification GO:0009952
The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
|
4 | Q9PT61 (/IMP) Q9PT61 (/IMP) Q9PVM0 (/IMP) Q9PVM0 (/IMP) |
Anterior/posterior pattern specification GO:0009952
The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
|
4 | Q28EM7 (/ISS) Q28EM7 (/ISS) Q9PVM0 (/ISS) Q9PVM0 (/ISS) |
Eye photoreceptor cell fate commitment GO:0042706
The process in which the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.
|
4 | Q28EM7 (/ISS) Q28EM7 (/ISS) Q9PVM0 (/ISS) Q9PVM0 (/ISS) |
Positive regulation of rhodopsin gene expression GO:0045872
Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression.
|
4 | P22810 (/IMP) P22810 (/IMP) Q9PT61 (/IMP) Q9PT61 (/IMP) |
Positive regulation of rhodopsin gene expression GO:0045872
Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression.
|
4 | Q28EM7 (/ISS) Q28EM7 (/ISS) Q9PVM0 (/ISS) Q9PVM0 (/ISS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
4 | Q28EM7 (/ISS) Q28EM7 (/ISS) Q9PVM0 (/ISS) Q9PVM0 (/ISS) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
4 | O54751 (/ISO) O54751 (/ISO) P80205 (/ISO) P80205 (/ISO) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
4 | Q28EM7 (/ISS) Q28EM7 (/ISS) Q9PVM0 (/ISS) Q9PVM0 (/ISS) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
3 | B5QSI6 (/IMP) Q9U2Y9 (/IMP) Q9U2Z0 (/IMP) |
Midbrain development GO:0030901
The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).
|
3 | P80205 (/IGI) P80205 (/IGI) Q90267 (/IGI) |
Thermosensory behavior GO:0040040
Behavior that is dependent upon the sensation of temperature.
|
3 | B5QSI6 (/IMP) Q9U2Y9 (/IMP) Q9U2Z0 (/IMP) |
Inner ear morphogenesis GO:0042472
The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.
|
3 | P80205 (/IMP) P80205 (/IMP) Q91994 (/IMP) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | Q6PH22 (/IMP) Q9PT61 (/IMP) Q9PT61 (/IMP) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
3 | O54751 (/IGI) O54751 (/IGI) Q9U2Z0 (/IGI) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
3 | Q9PT61 (/IMP) Q9PT61 (/IMP) Q9U2Z0 (/IMP) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Embryonic development via the syncytial blastoderm GO:0001700
The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Compound eye morphogenesis GO:0001745
The morphogenetic process in which the anatomical structures of the compound eye are generated and organized. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidium is composed of 20 cells, identified by cell type and position. An example of compound eye morphogenesis is found in Drosophila melanogaster.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Retinal pigment epithelium development GO:0003406
The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor cells.
|
2 | Q90267 (/IGI) Q91994 (/IGI) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | O54751 (/IDA) O54751 (/IDA) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
2 | P80205 (/IDA) P80205 (/IDA) |
Anterior region determination GO:0007355
Specification of the anterior (head and thoracic segments) of the embryo by the gap genes; exemplified in insects by the actions of hunchback gene product.
|
2 | P22810 (/TAS) P22810 (/TAS) |
Pattern specification process GO:0007389
Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
|
2 | P22810 (/NAS) P22810 (/NAS) |
Nervous system development GO:0007399
The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.
|
2 | P22810 (/TAS) P22810 (/TAS) |
Central nervous system development GO:0007417
The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Ventral cord development GO:0007419
The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
|
2 | P22810 (/IMP) P22810 (/IMP) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
|
2 | P22810 (/NAS) P22810 (/NAS) |
Circadian rhythm GO:0007623
Any biological process in an organism that recurs with a regularity of approximately 24 hours.
|
2 | Q9JLT8 (/IEP) Q9WTQ9 (/IEP) |
Adult walking behavior GO:0007628
The behavior of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg.
|
2 | P22810 (/TAS) P22810 (/TAS) |
Ocellus development GO:0008056
The process whose specific outcome is the progression of the ocellus over time, from its formation to the mature structure. The ocellus is a simple visual organ of insects.
|
2 | P22810 (/IGI) P22810 (/IGI) |
Anterior/posterior pattern specification GO:0009952
The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
|
2 | P80205 (/IGI) P80205 (/IGI) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Metencephalon development GO:0022037
The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure.
|
2 | P80205 (/IGI) P80205 (/IGI) |
Neuron differentiation GO:0030182
The process in which a relatively unspecialized cell acquires specialized features of a neuron.
|
2 | Q8JIZ3 (/IMP) Q9U2Z0 (/IMP) |
Forebrain development GO:0030900
The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).
|
2 | P80205 (/IGI) P80205 (/IGI) |
Brain segmentation GO:0035284
Division of the brain into a series of semi-repetitive parts or segments.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Anterior head segmentation GO:0035288
Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.
|
2 | P22810 (/TAS) P22810 (/TAS) |
Compound eye photoreceptor development GO:0042051
The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Compound eye photoreceptor development GO:0042051
The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.
|
2 | P22810 (/TAS) P22810 (/TAS) |
Rhabdomere development GO:0042052
The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Ocellus photoreceptor cell development GO:0042463
Development of photoreceptors, sensory cells that react to the presence of light, found in the ocellus.
|
2 | P22810 (/IGI) P22810 (/IGI) |
Inner ear morphogenesis GO:0042472
The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.
|
2 | P80205 (/IGI) P80205 (/IGI) |
Eye photoreceptor cell fate commitment GO:0042706
The process in which the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.
|
2 | Q9PT61 (/IMP) Q9PT61 (/IMP) |
Positive regulation of compound eye photoreceptor development GO:0045315
Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor development.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Negative regulation of rhodopsin gene expression GO:0045871
Any process that stops, prevents, or reduces the frequency, rate or extent of rhodopsin gene expression.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Positive regulation of photoreceptor cell differentiation GO:0046534
Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.
|
2 | Q9JLT8 (/IEP) Q9WTQ9 (/IEP) |
Photoreceptor cell fate commitment GO:0046552
The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Ocellus morphogenesis GO:0048816
The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.
|
2 | P22810 (/NAS) P22810 (/NAS) |
Diencephalon morphogenesis GO:0048852
The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.
|
2 | P80205 (/IGI) P80205 (/IGI) |
Retina development in camera-type eye GO:0060041
The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.
|
2 | O54751 (/IMP) O54751 (/IMP) |
Rhabdomere morphogenesis GO:0061541
The process in which the anatomical structures of a rhabdomere are generated and organized. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.
|
2 | P22810 (/IMP) P22810 (/IMP) |
Telomere maintenance GO:0000723
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.
|
1 | Q93356 (/TAS) |
Eye development GO:0001654
The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.
|
1 | Q8JIZ3 (/IMP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q93356 (/IMP) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q93356 (/IMP) |
Visual perception GO:0007601
The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
|
1 | Q8JIZ3 (/IMP) |
MRNA transcription GO:0009299
The cellular synthesis of messenger RNA (mRNA) from a DNA template.
|
1 | Q93356 (/ISS) |
Embryo development ending in birth or egg hatching GO:0009792
The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell.
|
1 | Q9U2Z0 (/IMP) |
Telomere capping GO:0016233
A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.
|
1 | Q93356 (/NAS) |
Cerebellum development GO:0021549
The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.
|
1 | Q90267 (/IGI) |
Hindbrain development GO:0030902
The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).
|
1 | Q90267 (/IGI) |
Midbrain-hindbrain boundary development GO:0030917
The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.
|
1 | Q90267 (/IGI) |
Telomere organization GO:0032200
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
|
1 | Q93356 (/NAS) |
Regulation of microvillus assembly GO:0032534
A process that modulates the formation of a microvillus.
|
1 | Q9U2Z0 (/IMP) |
Circadian regulation of gene expression GO:0032922
Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
|
1 | Q6PH22 (/IMP) |
Olfactory behavior GO:0042048
The behavior of an organism in response to an odor.
|
1 | Q93356 (/IMP) |
Eye photoreceptor cell development GO:0042462
Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.
|
1 | Q8JIZ3 (/IMP) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q6PH22 (/IGI) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q6PH22 (/IPI) |
Negative regulation of retinal cell programmed cell death GO:0046671
Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.
|
1 | Q8JIZ3 (/IMP) |
Neuron fate specification GO:0048665
The process in which a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.
|
1 | Q93356 (/IMP) |
Lateral semicircular canal development GO:0060875
The progession of the lateral semicircular canal from its initial formation to the mature structure.
|
1 | Q91994 (/IMP) |
Regulation of non-motile cilium assembly GO:1902855
Any process that modulates the frequency, rate or extent of non-motile cilium assembly.
|
1 | Q9U2Z0 (/IMP) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
17 |
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
O43186 (/ISS)
Q28EM7 (/ISS)
(7 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
9 | B5QSI6 (/IDA) O54751 (/IDA) O54751 (/IDA) Q9JLT8 (/IDA) Q9PT61 (/IDA) Q9PT61 (/IDA) Q9U2Y9 (/IDA) Q9U2Z0 (/IDA) Q9WTQ9 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | P22810 (/IC) P22810 (/IC) P80205 (/IC) P80205 (/IC) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | O54751 (/ISO) O54751 (/ISO) |
Transcription factor complex GO:0005667
A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
|
2 | O54751 (/IDA) O54751 (/IDA) |
Chromosome, telomeric region GO:0000781
The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins.
|
1 | Q93356 (/IDA) |
Nuclear chromosome, telomeric region GO:0000784
The terminal region of a linear nuclear chromosome that includes the telomeric DNA repeats and associated proteins.
|
1 | Q93356 (/IDA) |