The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 428: Transcription factor MYB39
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | Q9FLR1 (/ISS) Q9SPG2 (/ISS) Q9SPG2 (/ISS) Q9SPG5 (/ISS) Q9SPG5 (/ISS) |
|
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
3 | Q9FLR1 (/IPI) Q9SPG2 (/IPI) Q9SPG2 (/IPI) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
2 | Q9SPG2 (/NAS) Q9SPG2 (/NAS) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q9FLR1 (/IDA) |
There are 25 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Response to insect GO:0009625
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
|
5 | Q9FLR1 (/IEP) Q9SPG2 (/IEP) Q9SPG2 (/IEP) Q9SPG5 (/IEP) Q9SPG5 (/IEP) |
|
Response to jasmonic acid GO:0009753
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
|
5 | Q9FLR1 (/IEP) Q9SPG2 (/IEP) Q9SPG2 (/IEP) Q9SPG5 (/IEP) Q9SPG5 (/IEP) |
|
Regulation of glucosinolate biosynthetic process GO:0010439
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.
|
5 | Q9FLR1 (/IMP) Q9SPG2 (/IMP) Q9SPG2 (/IMP) Q9SPG5 (/IMP) Q9SPG5 (/IMP) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | Q9FLR1 (/IEP) Q9SPG2 (/IEP) Q9SPG2 (/IEP) |
|
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
|
3 | Q9FLR1 (/IEP) Q9SPG5 (/IEP) Q9SPG5 (/IEP) |
|
Response to wounding GO:0009611
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
|
3 | Q9FLR1 (/IEP) Q9SPG5 (/IEP) Q9SPG5 (/IEP) |
|
Response to bacterium GO:0009617
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
|
3 | Q9FLR1 (/IMP) Q9SPG2 (/IMP) Q9SPG2 (/IMP) |
|
Induced systemic resistance GO:0009682
A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.
|
3 | Q9FLR1 (/IMP) Q9SPG2 (/IMP) Q9SPG2 (/IMP) |
|
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
3 | Q9FLR1 (/IEP) Q9SPG2 (/IEP) Q9SPG2 (/IEP) |
|
Response to salicylic acid GO:0009751
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
|
3 | Q9FLR1 (/IEP) Q9SPG2 (/IEP) Q9SPG2 (/IEP) |
|
Cellular response to sulfur starvation GO:0010438
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.
|
3 | Q9FLR1 (/TAS) Q9SPG2 (/TAS) Q9SPG2 (/TAS) |
|
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
2 | Q9SPG5 (/IEP) Q9SPG5 (/IEP) |
|
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
|
2 | Q9SPG2 (/IMP) Q9SPG2 (/IMP) |
|
Response to high light intensity GO:0009644
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
|
1 | Q9FLR1 (/IDA) |
|
Response to high light intensity GO:0009644
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
|
1 | Q9FLR1 (/IMP) |
|
Hormone-mediated signaling pathway GO:0009755
A series of molecular signals mediated by the detection of a hormone.
|
1 | Q9FLR1 (/IMP) |
|
Drought recovery GO:0009819
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of prolonged deprivation of water that restores that organism to a normal (non-stressed) condition.
|
1 | Q9FLR1 (/IMP) |
|
Jasmonic acid mediated signaling pathway GO:0009867
A series of molecular signals mediated by jasmonic acid.
|
1 | Q9FLR1 (/IMP) |
|
Negative regulation of ethylene-activated signaling pathway GO:0010105
Any process that stops or prevents ethylene (ethene) signal transduction.
|
1 | Q9FLR1 (/IMP) |
|
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
|
1 | Q9FLR1 (/IEP) |
|
Mitochondria-nucleus signaling pathway GO:0031930
A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.
|
1 | Q9FLR1 (/IMP) |
|
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
|
1 | Q9FLR1 (/IGI) |
|
Regulation of RNA binding transcription factor activity GO:1905255
Any process that modulates the frequency, rate or extent of RNA binding transcription factor activity.
|
1 | Q9FLR1 (/IMP) |
|
Regulation of response to water deprivation GO:2000070
Any process that modulates the frequency, rate or extent of response to water deprivation.
|
1 | Q9FLR1 (/IDA) |
|
Regulation of response to water deprivation GO:2000070
Any process that modulates the frequency, rate or extent of response to water deprivation.
|
1 | Q9FLR1 (/IMP) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q9SPG2 (/IDA) Q9SPG2 (/IDA) |
