The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Antirestriction protein ArdA, domain 3
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: Antirestriction protein ArdA, domain 3

This superfamily represents the bacterial antirestriction (ArdA) protein C-terminal domain 3. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification PMID:12618468. ArdA forms a dimer and each monomer is comprised of three small alpha-beta domains, each with a different fold, arranged in a row in each monomer.

This entry represents domain 3 located at the C-terminal end of the monomeric subunit of ArdA. The C-terminal domain has a three-stranded beta-sheet and three alpha-helices packed together in a manner that creates a groove in the structure. The helical arrangement in the C-terminal domain contains a component of the winged helix-turn-helix motif. The evolution of ArdA is curious as domains 2 and 3 show a similar fold to that of nucleotide binding proteins but the opposite charge to the characteristic positive charge of oligonucleotide binding proteins. This reversal in surface potential suggests that ArdA is not a DNA- (or RNA)-binding protein PMID:19506028.

PFAM:PF07275,INTERPRO:IPR009899

GO Diversity

Unique GO annotations
1 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
1487 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 4
Domain clusters (>95% seq id): 1
Domain clusters (>35% seq id): 1
Unique PDBs: 1
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 1
Function
Unique EC:
Unique GO: 1
Taxonomy
Unique Species: 1487
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