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CATH Superfamily 1.10.10.10

Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 74: Arginine repressor

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Bacterial-type proximal promoter sequence-specific DNA binding GO:0000986
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a bacterial gene (or cistron, or operon). The proximal promoter is in cis with and relatively close to the core promoter.
 159 P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA)
(149 more)
Arginine binding GO:0034618
Interacting selectively and non-covalently with 2-amino-5-(carbamimidamido)pentanoic acid.
 159 P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA)
(149 more)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
 159 P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA)
(149 more)

There are 8 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein hexamerization GO:0034214
The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.
 159 P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA)
(149 more)
Plasmid recombination GO:0042150
A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.
 159 P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP)
(149 more)
Regulation of arginine biosynthetic process GO:1900079
Any process that modulates the frequency, rate or extent of arginine biosynthetic process.
 159 P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP)
(149 more)
Regulation of arginine catabolic process GO:1900081
Any process that modulates the frequency, rate or extent of arginine catabolic process.
 159 P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP) P0A6D0 (/IEP)
(149 more)
Negative regulation of DNA-templated transcription, initiation GO:2000143
Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-templated transcription initiation.
 159 P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA) P0A6D0 (/IDA)
(149 more)
Positive regulation of DNA-templated transcription, initiation GO:2000144
Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.
 159 P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP) P0A6D0 (/IMP)
(149 more)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
 8 Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS)
Arginine metabolic process GO:0006525
The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
 8 Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS) Q9KUT4 (/ISS)

There are 0 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
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