CATH Classification
Level | CATH Code | Description |
---|---|---|
1 | Mainly Alpha | |
1.10 | Orthogonal Bundle | |
1.10.10 | Arc Repressor Mutant, subunit A | |
1.10.10.1710 | Deoxyribodipyrimidine photolyase-related |
Domain Context
CATH Clusters
Superfamily | Deoxyribodipyrimidine photolyase-related |
Functional Family | (6-4) photolyase |
Enzyme Information
4.1.99.13 |
(6-4)DNA photolyase.
based on mapping to UniProt A9CH39
(6-4) photoproduct (in DNA) = 2 pyrimidine residues (in DNA).
-!- The overall repair reaction consists of two distinct steps, one of which is light-independent and the other one light-dependent. -!- In the initial light-independent step, a 6-iminium ion is thought to be generated via proton transfer induced by two histidines highly conserved among the (6-4) photolyases. -!- This intermediate spontaneously rearranges to form an oxetane intermediate by intramolecular nucleophilic attack. -!- In the subsequent light-driven reaction, one electron is believed to be transferred from the fully reduced FAD cofactor (FADH(-)) to the oxetane intermediate thus forming a neutral FADH radical and an anionic oxetane radical, which spontaneously fractures. -!- The excess electron is then back-transferred to the flavin radical restoring the fully reduced flavin cofactor and a pair of pyrimidine bases.
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UniProtKB Entries (1)
A9CH39 |
PHRB_AGRFC
Agrobacterium fabrum str. C58
(6-4) photolyase
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PDB Structure
PDB | 6DD6 |
External Links | |
Method | X-RAY DIFFRACTION |
Organism | |
Primary Citation |
Crystal-on-crystal chips for in situ serial diffraction at room temperature.
Lab Chip
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