CATH Classification

Domain Context

CATH Clusters

Superfamily 3.40.50.1100
Functional Family serine racemase isoform X2

Enzyme Information

4.3.1.18
D-serine ammonia-lyase.
based on mapping to UniProt Q9GZT4
D-serine = pyruvate + NH(3).
-!- The enzyme cleaves a carbon-oxygen bond, releasing a water molecule (hence the enzyme's original classification as EC 4.2.1.14) and an unstable enamine product that tautomerizes to an imine form, which undergoes a hydrolytic deamination to form pyruvate and ammonia. -!- The latter reaction, which can occur spontaneously, can also be catalyzed by EC 3.5.99.10. -!- Also acts, slowly, on D-threonine. -!- Formerly EC 4.2.1.14.
5.1.1.18
Serine racemase.
based on mapping to UniProt Q9GZT4
L-serine = D-serine.
-!- Highly selective for L-serine as substrate. -!- D-serine is found in type-II astrocytes in mammalian brain, where it appears to be an endogenous ligand of the glycine site of N-methyl-D- aspartate (NMDA) receptors. -!- The reaction can also occur in the reverse direction but does so more slowly at physiological serine concentrations.
4.3.1.17
L-serine ammonia-lyase.
based on mapping to UniProt Q9GZT4
L-serine = pyruvate + NH(3).
-!- The reaction catalyzed by both types of enzymes involves the initial elimination of water to form an enamine intermediate (hence the enzyme's original classification as EC 4.2.1.13) followed by tautomerization to an imine form and hydrolysis of the C-N bond. -!- The latter reaction, which can occur spontaneously, is also be catalyzed by EC 3.5.99.10. -!- This reaction is also carried out by EC 4.3.1.19 from a number of sources. -!- Formerly EC 4.2.1.13.

UniProtKB Entries (1)

Q9GZT4
SRR_HUMAN
Homo sapiens
Serine racemase

PDB Structure

PDB 5X2L
External Links
Method X-RAY DIFFRACTION
Organism
Primary Citation
Design, synthesis, and evaluation of novel inhibitors for wild-type human serine racemase.
Takahara, S., Nakagawa, K., Uchiyama, T., Yoshida, T., Matsumoto, K., Kawasumi, Y., Mizuguchi, M., Obita, T., Watanabe, Y., Hayakawa, D., Gouda, H., Mori, H., Toyooka, N.
Bioorg. Med. Chem. Lett.
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