PDB 5jvh

PDB Links
Overview

PDB Information

PDB	5JVH
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding. Krupkin, M., Wekselman, I., Matzov, D., Eyal, Z., Diskin Posner, Y., Rozenberg, H., Zimmerman, E., Bashan, A., Yonath, A. Proc.Natl.Acad.Sci.USA
Header	Ribosome
Released	2016-05-11
Resolution	3.580
CATH Insert Date	27 Nov, 2016

PDB Images (55)

5jvh

PDB 5jvh

5jvh1

PDB Chain 5jvh1

5jvh2

PDB Chain 5jvh2

5jvh3

PDB Chain 5jvh3

5jvhA

PDB Chain 5jvhA

5jvhB

PDB Chain 5jvhB

5jvhC

PDB Chain 5jvhC

5jvhD

PDB Chain 5jvhD

5jvhE

PDB Chain 5jvhE

5jvhG

PDB Chain 5jvhG

5jvhH

PDB Chain 5jvhH

5jvhI

PDB Chain 5jvhI

5jvhJ

PDB Chain 5jvhJ

5jvhK

PDB Chain 5jvhK

5jvhL

PDB Chain 5jvhL

5jvhM

PDB Chain 5jvhM

5jvhN

PDB Chain 5jvhN

5jvhO

PDB Chain 5jvhO

5jvhP

PDB Chain 5jvhP

5jvhQ

PDB Chain 5jvhQ

5jvhR

PDB Chain 5jvhR

5jvhS

PDB Chain 5jvhS

5jvhT

PDB Chain 5jvhT

5jvhU

PDB Chain 5jvhU

5jvhV

PDB Chain 5jvhV

5jvhW

PDB Chain 5jvhW

5jvhX

PDB Chain 5jvhX

5jvhY

PDB Chain 5jvhY

5jvhZ

PDB Chain 5jvhZ

5jvh100

CATH Domain 5jvh100

5jvh200

CATH Domain 5jvh200

5jvh300

CATH Domain 5jvh300

5jvhB00

CATH Domain 5jvhB00

5jvhC00

CATH Domain 5jvhC00

5jvhD00

CATH Domain 5jvhD00

5jvhE01

CATH Domain 5jvhE01

5jvhE02

CATH Domain 5jvhE02

5jvhG00

CATH Domain 5jvhG00

5jvhH00

CATH Domain 5jvhH00

5jvhI00

CATH Domain 5jvhI00

5jvhJ01

CATH Domain 5jvhJ01

5jvhK00

CATH Domain 5jvhK00

5jvhL01

CATH Domain 5jvhL01

5jvhM00

CATH Domain 5jvhM00

5jvhO00

CATH Domain 5jvhO00

5jvhP00

CATH Domain 5jvhP00

5jvhQ00

CATH Domain 5jvhQ00

5jvhR00

CATH Domain 5jvhR00

5jvhS01

CATH Domain 5jvhS01

5jvhS02

CATH Domain 5jvhS02

5jvhT01

CATH Domain 5jvhT01

5jvhU00

CATH Domain 5jvhU00

5jvhV00

CATH Domain 5jvhV00

5jvhW00

CATH Domain 5jvhW00

5jvhZ01

CATH Domain 5jvhZ01

PDB Prints

PDB Chains (28)

Chain ID	Date inserted into CATH	CATH Status
1	28 Nov, 2016	Chopped
2	28 Nov, 2016	Chopped
3	28 Nov, 2016	Chopped
A	28 Nov, 2016	Holding pen
B	28 Nov, 2016	Chopped
C	28 Nov, 2016	Chopped
D	28 Nov, 2016	Chopped
E	28 Nov, 2016	Chopped
G	28 Nov, 2016	Chopped
H	28 Nov, 2016	Chopped
I	28 Nov, 2016	Chopped
J	28 Nov, 2016	Chopped
K	28 Nov, 2016	Chopped
L	28 Nov, 2016	Chopped
M	28 Nov, 2016	Chopped
N	28 Nov, 2016	Holding pen
O	28 Nov, 2016	Chopped
P	28 Nov, 2016	Chopped
Q	28 Nov, 2016	Chopped
R	28 Nov, 2016	Chopped
S	28 Nov, 2016	Chopped
T	28 Nov, 2016	Chopped
U	28 Nov, 2016	Chopped
V	28 Nov, 2016	Chopped
W	28 Nov, 2016	Chopped
X	28 Nov, 2016	Rejected
Y	28 Nov, 2016	Rejected
Z	28 Nov, 2016	Chopped

CATH Domains (26)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5jvh100	01 Dec, 2016	2.20.28.120	Assigned
5jvh200	01 Dec, 2016	1.10.287.3980	Assigned
5jvh300	01 Dec, 2016	4.10.410.60	Assigned
5jvhB00	01 Dec, 2016		Holding pen
5jvhC00	01 Dec, 2016		Holding pen
5jvhD00	01 Dec, 2016	3.30.1440.10	Assigned
5jvhE01	01 Dec, 2016	3.90.930.12	Assigned
5jvhE02	01 Dec, 2016	3.90.930.12	Assigned
5jvhG00	14 Dec, 2017		Holding pen
5jvhH00	01 Dec, 2016	2.40.150.20	Assigned
5jvhI00	01 Dec, 2016		Holding pen
5jvhJ01	01 Dec, 2016	3.90.1170.10	Assigned
5jvhK00	01 Dec, 2016	3.90.1030.10	Assigned
5jvhL01	01 Dec, 2016	3.30.420.100	Assigned
5jvhM00	01 Dec, 2016		Holding pen
5jvhO00	01 Dec, 2016		Holding pen
5jvhP00	01 Dec, 2016	3.90.470.10	Assigned
5jvhQ00	01 Dec, 2016	3.30.70.330	Assigned
5jvhR00	01 Dec, 2016		Holding pen
5jvhS01	01 Dec, 2016	2.40.240.10	Assigned
5jvhS02	01 Dec, 2016	2.170.120.20	Assigned
5jvhT01	01 Dec, 2016		Holding pen
5jvhU00	01 Dec, 2016		Holding pen
5jvhV00	01 Dec, 2016		Holding pen
5jvhW00	01 Dec, 2016	3.30.1390.20	Assigned
5jvhZ01	01 Dec, 2016		Holding pen

UniProtKB Entries (25)

Accession	Gene ID	Taxon	Description
Q9RXJ2	RL14_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L14
Q9RSW7	RL20_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L20
Q9RSL3	RL6_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L6
Q9RXJ7	RL22_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L22
Q9RSL0	RL30_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L30
Q9RXJ0	RL5_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L5
P49228	RL32_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L32
Q9RXJ1	RL24_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L24
Q9RSH2	RL34_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L34
Q9RSK9	RL15_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L15
Q9RSS4	RL33_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L33
Q9RSL2	RL18_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L18
Q9RSW6	RL35_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L35
Q9RXJ4	RL29_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L29
Q9RXK1	RL4_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L4
Q9RSJ5	RL17_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L17
Q9RXK2	RL3_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L3
Q9RWB4	RL19_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L19
Q9RX88	RL25_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L25
Q9RXK0	RL23_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L23
Q9RRG8	RL28_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L28
Q9RXY1	RL13_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L13
Q9RXJ5	RL16_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L16
Q9RY65	RL27_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L27
Q9RXJ9	RL2_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L2