The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Cupin
".
FunFam 30: JmjC domain-containing protein 4
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
2-oxoglutarate-dependent dioxygenase activity GO:0016706
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
|
3 | Q08BY5 (/ISS) Q5ZHV5 (/ISS) Q8BFT6 (/ISS) |
|
Proximal promoter sequence-specific DNA binding GO:0000987
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter. The proximal promoter is in cis with and relatively close to the core promoter.
|
1 | Q67ZB6 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
1 | Q9H9V9 (/IPI) |
|
2-oxoglutarate-dependent dioxygenase activity GO:0016706
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
|
1 | Q9H9V9 (/IMP) |
|
2-oxoglutarate-dependent dioxygenase activity GO:0016706
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
|
1 | Q8BFT6 (/ISO) |
|
Histone demethylase activity GO:0032452
Catalysis of the removal of a methyl group from a histone.
|
1 | O13977 (/ISM) |
|
Histone demethylase activity (H3-R2 specific) GO:0033746
Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein.
|
1 | Q67ZB6 (/IDA) |
|
Histone demethylase activity (H4-R3 specific) GO:0033749
Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein.
|
1 | Q67ZB6 (/IDA) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein hydroxylation GO:0018126
The addition of a hydroxy group to a protein amino acid.
|
3 | Q08BY5 (/ISS) Q5ZHV5 (/ISS) Q8BFT6 (/ISS) |
|
Positive regulation of translational termination GO:0045905
Any process that activates or increases the frequency, rate or extent of translational termination.
|
3 | Q08BY5 (/ISS) Q5ZHV5 (/ISS) Q8BFT6 (/ISS) |
|
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
1 | O13977 (/ISM) |
|
Positive regulation of seed germination GO:0010030
Any process that activates or increase the rate of seed germination.
|
1 | Q67ZB6 (/IGI) |
|
Histone demethylation GO:0016577
The modification of histones by removal of methyl groups.
|
1 | O13977 (/ISM) |
|
Protein hydroxylation GO:0018126
The addition of a hydroxy group to a protein amino acid.
|
1 | Q9H9V9 (/IMP) |
|
Protein hydroxylation GO:0018126
The addition of a hydroxy group to a protein amino acid.
|
1 | Q8BFT6 (/ISO) |
|
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
|
1 | Q67ZB6 (/IGI) |
|
Positive regulation of translational termination GO:0045905
Any process that activates or increases the frequency, rate or extent of translational termination.
|
1 | Q9H9V9 (/IMP) |
|
Positive regulation of translational termination GO:0045905
Any process that activates or increases the frequency, rate or extent of translational termination.
|
1 | Q8BFT6 (/ISO) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
3 | Q08BY5 (/ISS) Q5ZHV5 (/ISS) Q8BFT6 (/ISS) |
|
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
1 | O13977 (/ISM) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q67ZB6 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q9H9V9 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q8BFT6 (/ISO) |
