The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster

Cmr2 is a subunit of CRISPR RNA-Cas protein complex and belongs to the greater Cas10 family of proteins. Its function is the recognition and cleavage of foreign RNA to protect prokaryotes from invading genetic elements. Cmr2 lacking the N-terminal HD (Histidine-Aspartate) hydrolase domain (Cmr2dHD) is fully functional in RNA cleavage as part of the Cmr complex.

The N-terminal domain D1 contains a ferredoxin-like fold (which contains a P-loop) and a cysteine cluster that is formed by two CXXC motifs. It is the largest of the four domains of Cmr2 and is composed of nine helices and three beta-strands. ADP binds near the P-loop region of the D1 domain. The D1 domain that constitutes one face of the active site pocket might fulfil the role of fingers domain (similarly to DNA polymerases) in binding the nucleotide.

DOI:10.1016/j.str.2012.01.018,DOI:10.1016/j.febslet.2012.02.036

GO Diversity

Unique GO annotations
1 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
631 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 6
Domain clusters (>95% seq id): 2
Domain clusters (>35% seq id): 1
Unique PDBs: 6
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 0
Function
Unique EC:
Unique GO: 1
Taxonomy
Unique Species: 631