CATH Superfamily 2.30.30.30

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	50S ribosomal protein L2	2414	3D	3pipA02	-	97.1
2	Transcription termination/antitermination factor NusG	2182	3D	2kvqG00	-	97.3
3	Elongation factor P	2065	3D	3a5zH01	-	97.2
4	50S ribosomal protein L24	2045		-	-	98.6
5	40S ribosomal protein S4	1168	3D	6g5iE03	-	94.9
6	60S ribosomal protein L8	920		-	-	97.1
9	60S ribosomal protein L26	866	3D	6em3Y00	-	99.6
7	Eukaryotic translation initiation factor 5A	859	3D	5dlqF01	-	92.9
8	50S ribosomal protein L2, chloroplastic	828		-	-	89.9
10	Elongation factor P	482		-	-	51.9
11	Elongation factor P-like protein	449		-	-	74.5
12	Eukaryotic translation initiation factor 5A	415	3D	3hksB01	-	92.0
13	Transcription elongation factor SPT5	390	3D	2e6zA00	-	96.9
14	60S ribosomal protein L6	374		-	-	96.3
15	E3 ubiquitin-protein ligase HERC2	344	3D	2jngA00	-	95.2
16	Transcription elongation factor SPT5	317	3D	2do3A01	-	89.5
19	Tumor suppressor p53-binding protein 1	270	3D	1ssfA02	-	93.8
17	Transcription elongation factor SPT5	270	3D	2e70A00	-	78.8
18	Transcription elongation factor SPT5	260		-	-	93.6
20	60S ribosomal protein L6	237		-	-	88.3
21	DNA/RNA-binding protein KIN17, putative	217	3D	2ckkA02	-	100.0
22	60S ribosomal protein L14	215		-	-	87.7
23	50S ribosomal protein L24	191		-	-	32.2
24	Transcription elongation factor SPT5	148		-	-	70.1
25	39S ribosomal protein L2, mitochondrial	142	3D	3j7yD02	-	76.6
30	60S ribosomal protein L14	139	3D	6em3M01	-	87.9
26	60S ribosomal protein L14-1	134		-	-	79.3
27	Transcription elongation factor SPT5	127		-	-	80.4
28	Transcription elongation factor SPT5	111		-	-	66.0
29	Transcription elongation factor SPT5	102		-	-	89.7
31	40S ribosomal protein S4-3	96		-	-	89.4
32	39S ribosomal protein L24, mitochondrial	91		-	-	85.9
33	Woronin body major protein HEX1	82	3D	1khiA01	-	53.0
34	50S ribosomal protein L2	78		-	-	78.3
35	Transcription termination/antitermination protein NusG	73		-	-	22.0
36	Elongation factor P-like protein	70		-	-	30.7
38	Translation initiation factor 5A	70	3D	2eifA01	-	88.0
37	Transcription termination/antitermination factor NusG	64		-	-	28.3
39	Elongation factor P	55		-	-	10.3
41	40S ribosomal protein S4	52	3D	6okkF03	-	88.0
40	Organellar elongation factor P	49		-	-	71.6
43	Transcription elongation factor SPT5	42		-	-	88.4
42	50S ribosomal protein L24	42		-	-	95.9
44	Elongation factor P	39		-	-	27.4
45	50S ribosomal protein L14e	37	3D	2kdsA01	-	92.7
46	Putative 60S ribosomal protein L6	34		-	-	78.4
47	60S ribosomal protein L2, mitochondrial	32		-	-	74.4
48	Mitochondrial ribosomal protein L2	31		-	-	87.1
49	Uncharacterized protein	28		-	-	21.3
51	50S ribosomal protein L24	24		-	-	76.0
50	60S ribosomal protein L14	24		-	-	62.0
52	50S ribosomal protein L24	23		-	-	20.2
55	50S ribosomal protein L2	22		-	-	52.2
53	Protein RNA-directed DNA methylation 3	22		-	-	94.5
54	Transcription elongation factor SPT5	22		-	-	74.2
58	Transcription elongation factor SPT5	21	3D	4ytlB02	-	85.8
61	Transcription elongation factor SPT5	19	3D	4ytlB01	-	65.7
57	Transcription elongation factor SPT5	19		-	-	10.5
56	50S ribosomal subunit L24	19		-	-	0.0
60	Transcription elongation factor SPT5	18		-	-	2.3
59	Transcription elongation factor SPT5	18		-	-	7.5
64	SPT5 homolog, DSIF elongation factor subunit	16		-	-	82.3
65	60S ribosomal protein L14, putative	16		-	-	4.3
63	Transcription elongation factor SPT5	16		-	-	82.6
62	Putative 40S ribosomal protein L14	16		-	-	26.4
66	60S ribosomal protein L14, putative	15		-	-	42.4
68	Putative ribosomal protein L2	13		-	-	22.9
69	30S ribosomal protein S4e	13		-	-	12.9
67	60S ribosomal protein L14 putative	13		-	-	12.1
70	60S ribosomal protein L6	13		-	-	83.9
71	Ribosomal protein L24/L26-like protein	12		-	-	25.2
72	KOW motif domain protein	12		-	-	22.6
73	30S ribosomal protein S4e	12		-	-	13.0
74	Transcription elongation regulator-like protein	11		-	-	43.4
75	Transcription termination/antitermination protein NusG	11		-	-	12.1
76	Transcription elongation factor SPT5	11		-	-	4.0
77	5'-3' exoribonuclease 1	11		-	-	4.5
78	Transcription termination/antitermination protein NusG	10		-	-	10.7
80	Eukaryotic translation initiation factor 5A	10		-	-	88.0
79	Transcription elongation factor SPT5	10		-	-	79.1
82	50S ribosomal protein L24	9		-	-	1.2
81	60S ribosomal protein L40, mitochondrial	9		-	-	1.2
84	Related to SPT5-transcription elongation protein	9		-	-	10.0
83	Transcription elongation factor SPT5	9		-	-	77.8
85	50S ribosomal protein L2	8		-	-	16.4
86	Transcription elongation factor SPT5	8		-	-	12.8
87	Ribosomal Protein, Large subunit	8		-	-	23.4
89	Transcription termination/antitermination protein NusG	7		-	-	9.7
91	40S ribosomal protein S4, X isoform, putative	7		-	-	0.0
92	Transcription initiation factor SPT5, putative	7		-	-	5.0
90	30S ribosomal protein S4e	7		-	-	57.5
88	Probable 39S ribosomal protein L24, mitochondrial	7		-	-	45.3
96	40S ribosomal protein S4	6		-	-	5.4
94	Transcription termination/antitermination protein NusG	6		-	-	13.9
95	PTAC13	6		-	-	11.3
93	LSU ribosomal protein L14E	6		-	-	1.5
97	Transcription initiation factor SPT5, putative	6		-	-	1.8
99	Ribosomal protein L26	5		-	-	1.8
98	50S ribosomal protein L24	5		-	-	4.1
101	Elongation factor P	4		-	-	7.0
105	Apicoplast ribosomal protein L2	4		-	-	15.9
110	50S ribosomal protein L24	4	3D	5dm7R00	-	11.5
102	Elongation factor P	4		-	-	17.5
100	Uncharacterized protein	4		-	-	2.5
104	Uncharacterized protein	4		-	-	14.2
103	Elongation factor P 1	4		-	-	5.4
116	5'-3' exoribonuclease 1	3		-	-	5.1
112	60S ribosomal protein RML2, mitochondrial	3		-	-	0.0
108	50S ribosomal protein L24	3		-	-	13.1
142	E3 ubiquitin-protein ligase UHRF2	3	3D	4tvrA02	-	53.2
117	Putative ribosomal protein S4 RPS4A	3		-	-	15.0
111	50S ribosomal protein L2 AFU_orthologue AFUA_4G12170	3		-	-	8.3
113	50S small subunit ribosomal protein L2	3		-	-	7.5
109	50S ribosomal protein L24	3		-	-	9.2
106	Ribosomal protein L14, putative	3		-	-	9.3
119	60S ribosomal protein L14	3		-	-	40.9
107	Elongation factor P EF-P	3		-	-	9.0
115	Transcription elongation factor SPT5	3		-	-	0.0
118	60S ribosomal protein L26-1	3		-	-	30.8
114	Translation elongation factor EF-P	3		-	-	14.6
127	Putative 60S ribosomal protein L14	2		-	-	0.0
136	Transcription elongation factor SPT5	2		-	-	0.0
137	Uncharacterized protein	2		-	-	0.0
128	Ribosomal protein L24	2		-	-	0.0
132	Ribosomal protein L2	2		-	-	0.0
139	Ribosomal protein L14	2		-	-	0.0
129	Uncharacterized protein	2		-	-	2.2
135	Transcription elongation factor SPT5	2		-	-	0.0
145	Eukaryotic translation initiation factor 5A	2		-	-	15.7
124	YALI0A20526p	2		-	-	0.0
120	Ribosomal protein L26, putative	2		-	-	21.0
131	60S ribosomal protein L2, mitochondrial	2		-	-	10.1
121	Uncharacterized protein	2		-	-	21.5
141	60S ribosomal protein L14	2		-	-	0.0
144	60S ribosomal protein L26-1	2		-	-	0.0
138	30S ribosomal protein S4e	2		-	-	0.0
130	Uncharacterized protein	2		-	-	0.0
140	60S ribosomal protein L14	2		-	-	0.0
122	60S ribosomal protein L14-1	2		-	-	43.2
125	50S ribosomal protein L24, chloroplastic	2		-	-	7.0
126	G patch domain and KOW motifs	2		-	-	12.2
143	5'-3' exoribonuclease 1	2		-	-	11.1
133	Translation elongation factor P	2		-	-	0.0
123	39S ribosomal protein L24, mitochondrial	2		-	-	0.0
134	Transcription elongation factor SPT5	2		-	-	0.0
153	Mitochondrial ribosomal protein L24	1		-	-	0.0
155	50S ribosomal protein L24	1		-	-	0.0
154	54S ribosomal protein L40, mitochondrial	1		-	-	0.0
158	Mitochondrial elongation factor P	1		-	-	0.0
165	Uncharacterized protein	1		-	-	0.0
147	60S ribosomal protein L26-1	1		-	-	0.0
149	60S ribosomal protein L6	1		-	-	0.0
152	60S ribosomal protein L26-1	1		-	-	0.0
161	Uncharacterized protein	1		-	-	0.0
148	Mitochondrial ribosomal protein L24	1		-	-	0.0
157	Ribosomal protein L29	1		-	-	0.0
146	Uncharacterized protein	1		-	-	0.0
164	Uncharacterized protein	1		-	-	0.0
160	SPT5 homolog, DSIF elongation factor subunit	1		-	-	0.0
151	Os01g0140500 protein	1		-	-	0.0
167	Uncharacterized protein	1		-	-	0.0
163	Uncharacterized protein	1		-	-	0.0
156	Uncharacterized protein	1		-	-	0.0
150	Uncharacterized protein	1		-	-	0.0
159	Global transcription factor	1		-	-	0.0
162	Predicted protein	1		-	-	0.0
166	p53-binding protein 1	1		-	-	0.0