View in Gene3D

CATH Superfamily 1.10.10.1810

RNA ligase

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
RNA ligase
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: RNA ligase

The name has been chosen based on UniProt-SwissProt entries which highlight the presence of the structural domains that constitute this superfamily in RNA ligases. This is further backed by both EC and GO entries.

Although RNA ligase 2 seems to be predominant, RNA ligase 1 does appear in some circumstances and there for this specification has not been included in the name.

The name given is consistent with the rest of the literature as well.

GO Diversity

Unique GO annotations
8 Unique GO terms

EC Diversity

Unique EC annotations
1 Unique EC terms

Species Diversity

Unique species annotations
243 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 5
Domain clusters (>95% seq id): 1
Domain clusters (>35% seq id): 1
Unique PDBs: 3
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 1
Function
Unique EC: 1
Unique GO: 8
Taxonomy
Unique Species: 243