CATH Classification
Level | CATH Code | Description |
---|---|---|
2 | Mainly Beta | |
2.60 | Sandwich | |
2.60.120 | Jelly Rolls | |
2.60.120.200 |
Domain Context
CATH Clusters
Superfamily | 2.60.120.200 |
Functional Family |
Enzyme Information
3.2.1.178 |
Beta-porphyranase.
based on mapping to UniProt B5CY92
Hydrolysis of beta-D-galactopyranose-(1->4)-alpha-L-galactopyranose-6- sulfate linkages in porphyran.
-!- The backbone of porphyran consists largely (approximately 70%) of (1->3)-linked beta-D-galactopyranose followed by (1->4)-linked alpha- L-galactopyranose-6-sulfate (the other 30% are mostly agarobiose repeating units of (1->3)-linked beta-D-galactopyranose followed by (1->4)-linked 3,6-anhydro-alpha-L-galactopyranose). -!- This enzyme cleaves the (1->4) linkages between beta-D- galactopyranose and alpha-L-galactopyranose-6-sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6-sulfate-(1->3)-beta-D- galactose, although some longer oligosaccharides of even number of residues are also observed. -!- Since the enzyme is inactive on the non-sulfated agarose portion of the porphyran backbone, some agarose fragments are also included in the products. -!- Methylation of the D-galactose prevents its binding at position -1.
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UniProtKB Entries (1)
B5CY92 |
PORB_BACPM
Bacteroides plebeius DSM 17135
Beta-porphyranase B
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PDB Structure
PDB | 4AWD |
External Links | |
Method | X-RAY DIFFRACTION |
Organism | |
Primary Citation |
Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
Proc. Natl. Acad. Sci. U.S.A.
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