CATH Classification
Level | CATH Code | Description |
---|---|---|
1 | Mainly Alpha | |
1.25 | Alpha Horseshoe | |
1.25.40 | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | |
1.25.40.120 | Protein prenylyltransferase |
Domain Context
CATH Clusters
Superfamily | Protein prenylyltransferase |
Functional Family | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha |
Enzyme Information
2.5.1.59 |
Protein geranylgeranyltransferase type I.
based on mapping to UniProt Q04631
Geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl- protein + diphosphate.
-!- This enzyme, along with EC 2.5.1.58 and EC 2.5.1.60, constitutes the protein prenyltransferase family of enzymes. -!- Catalyzes the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. -!- These protein acceptors have the C-terminal sequence CA(1)A(2)X, where the terminal residue, X, is preferably leucine; serine, methionine, alanine or glutamine makes the protein a substrate for EC 2.5.1.58. -!- The enzymes are relaxed in specificity for A(1), but cannot act if A(2) is aromatic. -!- Known targets of this enzyme include most gamma-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families. -!- The Zn(2+) is required for peptide, but not for isoprenoid, substrate binding.
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2.5.1.58 |
Protein farnesyltransferase.
based on mapping to UniProt Q04631
Farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.
-!- This enzyme, along with EC 2.5.1.59 and EC 2.5.1.60, constitutes the protein prenyltransferase family of enzymes. -!- Catalyzes the formation of a thioether linkage between the C-1 of an isoprenyl group and a cysteine residue fourth from the C-terminus of the protein. -!- These protein acceptors have the C-terminal sequence CA(1)A(2)X, where the terminal residue, X, is preferably serine, methionine, alanine or glutamine; leucine makes the protein a substrate for EC 2.5.1.59. -!- The enzymes are relaxed in specificity for A(1), but cannot act if A(2) is aromatic. -!- Substrates of the prenyltransferases include Ras, Rho, Rab, other Ras-related small GTP-binding proteins, gamma-subunits of heterotrimeric G-proteins, nuclear lamins, centromeric proteins and many proteins involved in visual signal transduction.
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UniProtKB Entries (1)
P53610 |
PGTB1_RAT
Rattus norvegicus
Geranylgeranyl transferase type-1 subunit beta
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PDB Structure
PDB | 1TNZ |
External Links | |
Method | X-RAY DIFFRACTION |
Organism | Spodoptera |
Primary Citation |
Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
J.Mol.Biol.
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