PDB 6okk

PDB Information

PDB6OKK
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Wong, W., Bai, X.C., Brown, A., Fernandez, I.S., Hanssen, E., Condron, M., Tan, Y.H., Baum, J., Scheres, S.H.
Elife
HeaderRibosome/Inhibitor
Released2019-04-13
Resolution3.300
CATH Insert Date26 May, 2019

PDB Images (64)

PDB Prints

PDB Chains (33)

Chain ID Date inserted into CATH CATH Status
a 26 May, 2019 Chopped
A 26 May, 2019 Rejected
b 26 May, 2019 Chopped
B 26 May, 2019 Chopped
c 26 May, 2019 Chopped
C 26 May, 2019 Chopped
d 26 May, 2019 Chopped
D 26 May, 2019 Holding pen
e 26 May, 2019 Chopped
E 26 May, 2019 Chopped
f 26 May, 2019 Holding pen
F 26 May, 2019 Chopped
g 26 May, 2019 Rejected
G 26 May, 2019 Chopped
H 26 May, 2019 Holding pen
I 26 May, 2019 Chopped
J 26 May, 2019 Chopped
K 26 May, 2019 Chopped
L 26 May, 2019 Chopped
M 26 May, 2019 Holding pen
N 26 May, 2019 Chopped
O 26 May, 2019 Chopped
P 26 May, 2019 Chopped
Q 26 May, 2019 Chopped
R 26 May, 2019 Chopped
S 26 May, 2019 Holding pen
T 26 May, 2019 Chopped
U 26 May, 2019 Chopped
V 26 May, 2019 Chopped
W 26 May, 2019 Holding pen
X 26 May, 2019 Chopped
Y 26 May, 2019 Chopped
Z 26 May, 2019 Chopped

CATH Domains (30)

Domain ID Date inserted into CATH Superfamily CATH Status
6okka00 27 May, 2019 3.30.70.3370 Assigned
6okkb00 27 May, 2019 Holding pen
6okkB01 27 May, 2019 Holding pen
6okkc00 27 May, 2019 3.30.1740.20 Assigned
6okkC01 27 May, 2019 3.40.50.10490 Assigned
6okkd00 27 May, 2019 2.20.25.100 Assigned
6okke00 27 May, 2019 2.40.50.140 Assigned
6okkE01 27 May, 2019 Holding pen
6okkF01 27 May, 2019 3.10.290.10 Assigned
6okkF02 27 May, 2019 2.40.50.740 Assigned
6okkF03 27 May, 2019 2.30.30.30 Assigned
6okkG01 27 May, 2019 3.30.160.20 Assigned
6okkG02 27 May, 2019 3.30.230.10 Assigned
6okkI00 27 May, 2019 1.10.455.10 Assigned
6okkJ00 27 May, 2019 Holding pen
6okkK01 27 May, 2019 3.30.1370.30 Assigned
6okkK02 27 May, 2019 3.30.1490.10 Assigned
6okkL01 27 May, 2019 Holding pen
6okkN00 27 May, 2019 3.30.70.600 Assigned
6okkO00 27 May, 2019 1.10.10.10 Assigned
6okkP00 27 May, 2019 3.30.420.80 Assigned
6okkQ00 27 May, 2019 Holding pen
6okkR00 27 May, 2019 3.30.1330.30 Assigned
6okkT00 27 May, 2019 4.10.830.10 Assigned
6okkU01 27 May, 2019 Holding pen
6okkU02 27 May, 2019 1.10.287.10 Assigned
6okkV00 27 May, 2019 2.40.50.1000 Assigned
6okkX01 27 May, 2019 3.30.860.10 Assigned
6okkY00 27 May, 2019 1.10.10.10 Assigned
6okkZ00 27 May, 2019 3.30.1230.20 Assigned

UniProtKB Entries (28)

Accession Gene ID Taxon Description
Q8IKH8 Q8IKH8_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S3
Q8IK02 Q8IK02_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S20e, putative
Q8IHS5 Q8IHS5_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S21
Q8IBN5 Q8IBN5_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S5, putative
Q8IJD4 RSSA_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein SA
Q8IKL9 Q8IKL9_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S28e, putative
Q8IDB0 Q8IDB0_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S15
O77395 O77395_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S15A, putative
Q8IIU8 Q8IIU8_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S4
O97249 RS12_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S12
Q8I502 Q8I502_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S17, putative
C0H5C2 C0H5C2_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S19
Q8I3U6 Q8I3U6_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S11
O97248 O97248_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S23, putative
Q8I3R6 Q8I3R6_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S24
Q8I3R0 Q8I3R0_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S9, putative
Q8IM10 Q8IM10_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S8
O77381 O77381_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S11, putative
Q8IBQ5 Q8IBQ5_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S10, putative
A0A0L7M7C8 A0A0L7M7C8_PLAF4 Plasmodium falciparum Dd2 40S ribosomal protein S16
Q8IFP2 Q8IFP2_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S19
Q8IIA2 Q8IIA2_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S18, putative
Q8IL02 Q8IL02_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S5
Q8ILN8 Q8ILN8_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S25
Q8IDR9 Q8IDR9_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S6
O96258 O96258_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S26
C0H4K8 C0H4K8_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S29, putative
Q8IEN2 Q8IEN2_PLAF7 Plasmodium falciparum 3D7 40S ribosomal protein S27