PDB 6nd3
PDB Information
| PDB | 6ND3 |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli BL21(DE3) |
| Gene Source | Desulfovibrio alaskensis (strain G20) |
| Primary Citation | Structure-Guided Identification of a Small Molecule That Inhibits Anaerobic Choline Metabolism by Human Gut Bacteria.
J.Am.Chem.Soc.
|
| Header | Lyase |
| Released | 2018-12-13 |
| Resolution | 2.360 |
| CATH Insert Date | 20 Jan, 2019 |
PDB Images (17)
6nd3
PDB 6nd3
6nd3A
PDB Chain 6nd3A
6nd3B
PDB Chain 6nd3B
6nd3C
PDB Chain 6nd3C
6nd3D
PDB Chain 6nd3D
6nd3E
PDB Chain 6nd3E
6nd3F
PDB Chain 6nd3F
6nd3G
PDB Chain 6nd3G
6nd3H
PDB Chain 6nd3H
6nd3A01
CATH Domain 6nd3A01
6nd3B01
CATH Domain 6nd3B01
6nd3C01
CATH Domain 6nd3C01
6nd3D01
CATH Domain 6nd3D01
6nd3E01
CATH Domain 6nd3E01
6nd3F01
CATH Domain 6nd3F01
6nd3G01
CATH Domain 6nd3G01
6nd3H01
CATH Domain 6nd3H01
PDB Prints
PDB Chains (8)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 20 Jan, 2019 | Chopped |
| B | 20 Jan, 2019 | Chopped |
| C | 20 Jan, 2019 | Chopped |
| D | 20 Jan, 2019 | Chopped |
| E | 20 Jan, 2019 | Chopped |
| F | 20 Jan, 2019 | Chopped |
| G | 20 Jan, 2019 | Chopped |
| H | 20 Jan, 2019 | Chopped |
CATH Domains (8)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 6nd3A01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3B01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3C01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3D01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3E01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3F01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3G01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
| 6nd3H01 | 21 Jan, 2019 | 3.20.70.20 | Assigned |
UniProtKB Entries (8)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |
| Q30W70 | CUTC_DESAG | Desulfovibrio alaskensis G20 | Choline trimethylamine-lyase |