PDB 6j6h
PDB Information
| PDB | 6J6H |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching.
Cell
|
| Header | Splicing |
| Released | 2019-01-15 |
| Resolution | 3.600 |
| CATH Insert Date | 28 Apr, 2019 |
PDB Images (56)
6j6h
PDB 6j6h
6j6ha
PDB Chain 6j6ha
6j6hA
PDB Chain 6j6hA
6j6hb
PDB Chain 6j6hb
6j6hB
PDB Chain 6j6hB
6j6hc
PDB Chain 6j6hc
6j6hC
PDB Chain 6j6hC
6j6hd
PDB Chain 6j6hd
6j6hD
PDB Chain 6j6hD
6j6he
PDB Chain 6j6he
6j6hE
PDB Chain 6j6hE
6j6hg
PDB Chain 6j6hg
6j6hh
PDB Chain 6j6hh
6j6hH
PDB Chain 6j6hH
6j6hi
PDB Chain 6j6hi
6j6hI
PDB Chain 6j6hI
6j6hj
PDB Chain 6j6hj
6j6hJ
PDB Chain 6j6hJ
6j6hk
PDB Chain 6j6hk
6j6hl
PDB Chain 6j6hl
6j6hL
PDB Chain 6j6hL
6j6hm
PDB Chain 6j6hm
6j6hn
PDB Chain 6j6hn
6j6ho
PDB Chain 6j6ho
6j6hO
PDB Chain 6j6hO
6j6hp
PDB Chain 6j6hp
6j6hP
PDB Chain 6j6hP
6j6hq
PDB Chain 6j6hq
6j6hQ
PDB Chain 6j6hQ
6j6hr
PDB Chain 6j6hr
6j6hR
PDB Chain 6j6hR
6j6hs
PDB Chain 6j6hs
6j6hS
PDB Chain 6j6hS
6j6ht
PDB Chain 6j6ht
6j6hT
PDB Chain 6j6hT
6j6hu
PDB Chain 6j6hu
6j6hv
PDB Chain 6j6hv
6j6hw
PDB Chain 6j6hw
6j6hx
PDB Chain 6j6hx
6j6hy
PDB Chain 6j6hy
6j6hz
PDB Chain 6j6hz
6j6hZ
PDB Chain 6j6hZ
6j6ha00
CATH Domain 6j6ha00
6j6hb00
CATH Domain 6j6hb00
6j6he00
CATH Domain 6j6he00
6j6hg00
CATH Domain 6j6hg00
6j6hh00
CATH Domain 6j6hh00
6j6hi00
CATH Domain 6j6hi00
6j6hI00
CATH Domain 6j6hI00
6j6hj00
CATH Domain 6j6hj00
6j6hl00
CATH Domain 6j6hl00
6j6hm00
CATH Domain 6j6hm00
6j6hu00
CATH Domain 6j6hu00
6j6hw00
CATH Domain 6j6hw00
6j6hx00
CATH Domain 6j6hx00
6j6hy00
CATH Domain 6j6hy00
PDB Prints
PDB Chains (41)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| a | 28 Apr, 2019 | Chopped |
| A | 28 Apr, 2019 | Holding pen |
| b | 28 Apr, 2019 | Chopped |
| B | 28 Apr, 2019 | Rejected |
| c | 28 Apr, 2019 | Holding pen |
| C | 28 Apr, 2019 | Holding pen |
| d | 28 Apr, 2019 | Holding pen |
| D | 28 Apr, 2019 | Rejected |
| e | 28 Apr, 2019 | Chopped |
| E | 28 Apr, 2019 | Rejected |
| g | 28 Apr, 2019 | Chopped |
| h | 28 Apr, 2019 | Chopped |
| H | 28 Apr, 2019 | Rejected |
| i | 28 Apr, 2019 | Chopped |
| I | 28 Apr, 2019 | Chopped |
| j | 28 Apr, 2019 | Chopped |
| J | 28 Apr, 2019 | Rejected |
| k | 28 Apr, 2019 | Holding pen |
| l | 28 Apr, 2019 | Chopped |
| L | 28 Apr, 2019 | Rejected |
| m | 28 Apr, 2019 | Chopped |
| n | 28 Apr, 2019 | Rejected |
| o | 28 Apr, 2019 | Holding pen |
| O | 28 Apr, 2019 | Holding pen |
| p | 28 Apr, 2019 | Holding pen |
| P | 28 Apr, 2019 | Holding pen |
| q | 28 Apr, 2019 | Holding pen |
| Q | 28 Apr, 2019 | Holding pen |
| r | 28 Apr, 2019 | Holding pen |
| R | 28 Apr, 2019 | Holding pen |
| s | 28 Apr, 2019 | Holding pen |
| S | 28 Apr, 2019 | Holding pen |
| t | 28 Apr, 2019 | Holding pen |
| T | 28 Apr, 2019 | Holding pen |
| u | 28 Apr, 2019 | Chopped |
| v | 28 Apr, 2019 | Holding pen |
| w | 28 Apr, 2019 | Chopped |
| x | 28 Apr, 2019 | Chopped |
| y | 28 Apr, 2019 | Chopped |
| z | 28 Apr, 2019 | Ballcock |
| Z | 28 Apr, 2019 | Holding pen |
CATH Domains (14)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 6j6ha00 | 29 Apr, 2019 | 3.30.70.330 | Assigned |
| 6j6hb00 | 29 Apr, 2019 | Holding pen | |
| 6j6he00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hg00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hh00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hi00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hI00 | 29 Apr, 2019 | Holding pen | |
| 6j6hj00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hl00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hm00 | 29 Apr, 2019 | Holding pen | |
| 6j6hu00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hw00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hx00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
| 6j6hy00 | 29 Apr, 2019 | 2.30.30.100 | Assigned |
UniProtKB Entries (31)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| Q12309 | CLF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CLF1 |
| P36048 | SN114_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SNU114 |
| Q06217 | SMD2_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D2 |
| P43321 | SMD3_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D3 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| Q08963 | RU2A_YEAST | Saccharomyces cerevisiae S288C | U2 small nuclear ribonucleoprotein A' |
| P21374 | ISY1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor ISY1 |
| P53333 | CWC22_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC22 |
| Q02260 | SMD1_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D1 |
| Q04048 | SYF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SYF1 |
| Q06217 | SMD2_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D2 |
| P40018 | RSMB_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein-associated protein B |
| P40018 | RSMB_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein-associated protein B |
| P40204 | RUXG_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein G |
| P33334 | PRP8_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 8 |
| Q03654 | CEF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CEF1 |
| Q12330 | RUXE_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein E |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| P40204 | RUXG_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein G |
| P43321 | SMD3_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D3 |
| P54999 | RUXF_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein F |
| Q12330 | RUXE_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein E |
| Q03375 | CWC21_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC21 |
| P40567 | MSL1_YEAST | Saccharomyces cerevisiae S288C | U2 small nuclear ribonucleoprotein B'' |
| Q12046 | CWC2_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC2 |
| Q02260 | SMD1_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D1 |
| P54999 | RUXF_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein F |
| Q12417 | PRP46_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor PRP46 |
| P32523 | PRP19_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 19 |
| P40968 | PRP17_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 17 |