PDB 6cde

PDB Information

PDB6CDE
MethodELECTRON MICROSCOPY
Host OrganismHomo sapiens
Gene SourceHomo sapiens
Primary Citation
Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
Xu, K., Acharya, P., Kong, R., Cheng, C., Chuang, G.Y., Liu, K., Louder, M.K., O'Dell, S., Rawi, R., Sastry, M., Shen, C.H., Zhang, B., Zhou, T., Asokan, M., Bailer, R.T., Chambers, M., Chen, X., Choi, C.W., Dandey, V.P., Doria-Rose, N.A., Druz, A., Eng, E.T., Farney, S.K., Foulds, K.E., Geng, H., Georgiev, I.S., Gorman, J., Hill, K.R., Jafari, A.J., Kwon, Y.D., Lai, Y.T., Lemmin, T., McKee, K., Ohr, T.Y., Ou, L., Peng, D., Rowshan, A.P., Sheng, Z., Todd, J.P., Tsybovsky, Y., Viox, E.G., Wang, Y., Wei, H., Yang, Y., Zhou, A.F., Chen, R., Yang, L., Scorpio, D.G., McDermott, A.B., Shapiro, L., Carragher, B., Potter, C.S., Mascola, J.R., Kwong, P.D.
Nat. Med.
HeaderViral Protein
Released2018-02-08
Resolution3.800
CATH Insert Date03 Jun, 2018

PDB Images (52)

PDB Prints

PDB Chains (24)

Chain ID Date inserted into CATH CATH Status
1 03 Jun, 2018 Holding pen
2 03 Jun, 2018 Chopped
3 03 Jun, 2018 Chopped
4 03 Jun, 2018 Chopped
5 03 Jun, 2018 Chopped
6 03 Jun, 2018 Chopped
7 03 Jun, 2018 Chopped
8 03 Jun, 2018 Chopped
c 03 Jun, 2018 Chopped
C 03 Jun, 2018 Chopped
d 03 Jun, 2018 Holding pen
D 03 Jun, 2018 Holding pen
h 03 Jun, 2018 Chopped
H 03 Jun, 2018 Chopped
l 03 Jun, 2018 Chopped
L 03 Jun, 2018 Chopped
m 03 Jun, 2018 Chopped
M 03 Jun, 2018 Chopped
n 03 Jun, 2018 Chopped
N 03 Jun, 2018 Chopped
q 03 Jun, 2018 Chopped
Q 03 Jun, 2018 Chopped
r 03 Jun, 2018 Chopped
R 03 Jun, 2018 Chopped

CATH Domains (27)

Domain ID Date inserted into CATH Superfamily CATH Status
6cde201 28 Jun, 2018 Holding pen
6cde202 28 Jun, 2018 Holding pen
6cde203 28 Jun, 2018 Holding pen
6cde300 28 Jun, 2018 Holding pen
6cde400 28 Jun, 2018 2.60.40.10 Assigned
6cde500 28 Jun, 2018 2.60.40.10 Assigned
6cde600 28 Jun, 2018 2.60.40.10 Assigned
6cde700 28 Jun, 2018 Holding pen
6cde800 28 Jun, 2018 2.60.40.10 Assigned
6cdec01 28 Jun, 2018 Holding pen
6cdeC01 28 Jun, 2018 Holding pen
6cdec02 28 Jun, 2018 Holding pen
6cdeC02 28 Jun, 2018 Holding pen
6cdec03 28 Jun, 2018 Holding pen
6cdeC03 28 Jun, 2018 Holding pen
6cdeh00 28 Jun, 2018 Holding pen
6cdeH00 28 Jun, 2018 Holding pen
6cdel00 28 Jun, 2018 2.60.40.10 Assigned
6cdeL00 28 Jun, 2018 2.60.40.10 Assigned
6cdem00 28 Jun, 2018 Holding pen
6cdeM00 28 Jun, 2018 Holding pen
6cden00 28 Jun, 2018 2.60.40.10 Assigned
6cdeN00 28 Jun, 2018 2.60.40.10 Assigned
6cdeq00 28 Jun, 2018 2.60.40.10 Assigned
6cdeQ00 28 Jun, 2018 2.60.40.10 Assigned
6cder00 28 Jun, 2018 2.60.40.10 Assigned
6cdeR00 28 Jun, 2018 2.60.40.10 Assigned

UniProtKB Entries (6)

Accession Gene ID Taxon Description
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160