PDB 6bqf
PDB Information
| PDB | 6BQF |
| Method | X-RAY DIFFRACTION |
| Host Organism | Saccharomyces cerevisiae |
| Gene Source | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Primary Citation | Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A.
|
| Header | Transferase/Transcription |
| Released | 2017-11-27 |
| Resolution | 3.350 |
| CATH Insert Date | 03 Jun, 2018 |
PDB Images (22)
6bqf
PDB 6bqf
6bqfA
PDB Chain 6bqfA
6bqfB
PDB Chain 6bqfB
6bqfC
PDB Chain 6bqfC
6bqfE
PDB Chain 6bqfE
6bqfF
PDB Chain 6bqfF
6bqfH
PDB Chain 6bqfH
6bqfI
PDB Chain 6bqfI
6bqfJ
PDB Chain 6bqfJ
6bqfK
PDB Chain 6bqfK
6bqfL
PDB Chain 6bqfL
6bqfR
PDB Chain 6bqfR
6bqfT
PDB Chain 6bqfT
6bqfC01
CATH Domain 6bqfC01
6bqfC02
CATH Domain 6bqfC02
6bqfE01
CATH Domain 6bqfE01
6bqfE02
CATH Domain 6bqfE02
6bqfF00
CATH Domain 6bqfF00
6bqfH00
CATH Domain 6bqfH00
6bqfJ00
CATH Domain 6bqfJ00
6bqfK00
CATH Domain 6bqfK00
6bqfL00
CATH Domain 6bqfL00
PDB Prints
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 03 Jun, 2018 | Holding pen |
| B | 03 Jun, 2018 | Holding pen |
| C | 03 Jun, 2018 | Chopped |
| E | 03 Jun, 2018 | Chopped |
| F | 03 Jun, 2018 | Chopped |
| H | 03 Jun, 2018 | Chopped |
| I | 03 Jun, 2018 | Holding pen |
| J | 03 Jun, 2018 | Chopped |
| K | 03 Jun, 2018 | Chopped |
| L | 03 Jun, 2018 | Chopped |
| R | 03 Jun, 2018 | Rejected |
| T | 03 Jun, 2018 | Rejected |
CATH Domains (9)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 6bqfC01 | 28 Jun, 2018 | 3.30.1360.10 | Assigned |
| 6bqfC02 | 28 Jun, 2018 | 2.170.120.12 | Assigned |
| 6bqfE01 | 28 Jun, 2018 | 3.40.1340.10 | Assigned |
| 6bqfE02 | 28 Jun, 2018 | 3.90.940.20 | Assigned |
| 6bqfF00 | 28 Jun, 2018 | 3.90.940.10 | Assigned |
| 6bqfH00 | 28 Jun, 2018 | 2.40.50.140 | Assigned |
| 6bqfJ00 | 28 Jun, 2018 | 1.10.10.60 | Assigned |
| 6bqfK00 | 28 Jun, 2018 | 3.30.1360.10 | Assigned |
| 6bqfL00 | 28 Jun, 2018 | 2.20.28.30 | Assigned |
UniProtKB Entries (10)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P27999 | RPB9_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB9 |
| P20435 | RPAB2_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
| P40422 | RPAB4_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
| P20434 | RPAB1_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
| P20436 | RPAB3_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
| P22139 | RPAB5_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
| P04050 | RPB1_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB1 |
| P08518 | RPB2_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB2 |
| P38902 | RPB11_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB11 |
| P16370 | RPB3_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB3 |
