PDB Information

PDB5ZZN
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Thylakoid membrane lipid sulfoquinovosyl-diacylglycerol (SQDG) is required for full functioning of photosystem II inThermosynechococcus elongatus.
Nakajima, Y., Umena, Y., Nagao, R., Endo, K., Kobayashi, K., Akita, F., Suga, M., Wada, H., Noguchi, T., Shen, J.R.
J. Biol. Chem.
HeaderElectron Transport
Released2018-06-03
Resolution2.100
CATH Insert Date05 Aug, 2018

PDB Images (62)

PDB Prints

PDB Chains (38)

Chain ID Date inserted into CATH CATH Status
a 05 Aug, 2018 Chopped
A 05 Aug, 2018 Chopped
b 05 Aug, 2018 Chopped
B 05 Aug, 2018 Chopped
c 05 Aug, 2018 Chopped
C 05 Aug, 2018 Chopped
d 05 Aug, 2018 Chopped
D 05 Aug, 2018 Chopped
e 05 Aug, 2018 Chopped
E 05 Aug, 2018 Chopped
f 05 Aug, 2018 Rejected
F 05 Aug, 2018 Rejected
h 05 Aug, 2018 Chopped
H 05 Aug, 2018 Chopped
i 05 Aug, 2018 Rejected
I 05 Aug, 2018 Rejected
j 05 Aug, 2018 Chopped
J 05 Aug, 2018 Rejected
k 05 Aug, 2018 Rejected
K 05 Aug, 2018 Rejected
l 05 Aug, 2018 Rejected
L 05 Aug, 2018 Rejected
m 05 Aug, 2018 Rejected
M 05 Aug, 2018 Rejected
o 05 Aug, 2018 Holding pen
O 05 Aug, 2018 Holding pen
t 05 Aug, 2018 Rejected
T 05 Aug, 2018 Rejected
u 05 Aug, 2018 Chopped
U 05 Aug, 2018 Chopped
v 05 Aug, 2018 Chopped
V 05 Aug, 2018 Chopped
x 05 Aug, 2018 Rejected
X 05 Aug, 2018 Rejected
y 05 Aug, 2018 Rejected
Y 05 Aug, 2018 Rejected
z 05 Aug, 2018 Chopped
Z 05 Aug, 2018 Chopped

CATH Domains (23)

Domain ID Date inserted into CATH Superfamily CATH Status
5zzna00 06 Aug, 2018 Holding pen
5zznA00 06 Aug, 2018 Holding pen
5zznb01 06 Aug, 2018 Holding pen
5zznB01 06 Aug, 2018 Holding pen
5zznb02 06 Aug, 2018 3.10.680.10 Assigned
5zznB02 06 Aug, 2018 3.10.680.10 Assigned
5zznc01 06 Aug, 2018 Holding pen
5zznC01 06 Aug, 2018 Holding pen
5zznc02 06 Aug, 2018 1.10.10.670 Assigned
5zznC02 06 Aug, 2018 1.10.10.670 Assigned
5zznd00 06 Aug, 2018 Holding pen
5zznD00 06 Aug, 2018 Holding pen
5zzne00 06 Aug, 2018 1.20.5.860 Assigned
5zznE00 06 Aug, 2018 1.20.5.860 Assigned
5zznh01 06 Aug, 2018 1.20.5.880 Assigned
5zznH01 06 Aug, 2018 1.20.5.880 Assigned
5zznj00 06 Aug, 2018 6.10.250.2070 Assigned
5zznu01 06 Aug, 2018 1.10.150.320 Assigned
5zznU01 06 Aug, 2018 1.10.150.320 Assigned
5zznv00 06 Aug, 2018 1.10.760.10 Assigned
5zznV00 06 Aug, 2018 1.10.760.10 Assigned
5zznz00 06 Aug, 2018 1.10.287.740 Assigned
5zznZ00 06 Aug, 2018 1.10.287.740 Assigned

UniProtKB Entries (24)

Accession Gene ID Taxon Description
Q8DIP0 PSBE_THEEB Thermosynechococcus elongatus BP-1 Cytochrome b559 subunit alpha
P59087 PSBJ_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein J
Q9F1R6 PSBX_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center X protein
P59087 PSBJ_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein J
Q8DJ43 PSBH_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein H
Q8DIF8 PSBC_THEEB Thermosynechococcus elongatus BP-1 Photosystem II CP43 reaction center protein
P0A444 PSBA1_THEEB Thermosynechococcus elongatus BP-1 Photosystem II protein D1 1
P0A444 PSBA1_THEEB Thermosynechococcus elongatus BP-1 Photosystem II protein D1 1
Q8DIQ1 PSBB_THEEB Thermosynechococcus elongatus BP-1 Photosystem II CP47 reaction center protein
P0A431 PSBO_THEEB Thermosynechococcus elongatus BP-1 Photosystem II manganese-stabilizing polypeptide
Q8CM25 PSBD_THEEB Thermosynechococcus elongatus BP-1 Photosystem II D2 protein
Q9F1R6 PSBX_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center X protein
P0A386 CY550_THEEB Thermosynechococcus elongatus BP-1 Cytochrome c-550
P0A386 CY550_THEEB Thermosynechococcus elongatus BP-1 Cytochrome c-550
Q9F1L5 PSBU_THEEB Thermosynechococcus elongatus BP-1 Photosystem II 12 kDa extrinsic protein
Q8DJ43 PSBH_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein H
Q9F1L5 PSBU_THEEB Thermosynechococcus elongatus BP-1 Photosystem II 12 kDa extrinsic protein
P0A431 PSBO_THEEB Thermosynechococcus elongatus BP-1 Photosystem II manganese-stabilizing polypeptide
Q8DHJ2 PSBZ_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein Z
Q8DIQ1 PSBB_THEEB Thermosynechococcus elongatus BP-1 Photosystem II CP47 reaction center protein
Q8CM25 PSBD_THEEB Thermosynechococcus elongatus BP-1 Photosystem II D2 protein
Q8DIP0 PSBE_THEEB Thermosynechococcus elongatus BP-1 Cytochrome b559 subunit alpha
Q8DHJ2 PSBZ_THEEB Thermosynechococcus elongatus BP-1 Photosystem II reaction center protein Z
Q8DIF8 PSBC_THEEB Thermosynechococcus elongatus BP-1 Photosystem II CP43 reaction center protein