PDB 5z84

PDB Links
Overview

PDB Information

PDB	5Z84
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	X-ray structural analyses of azide-bound cytochromecoxidases reveal that the H-pathway is critically important for the proton-pumping activity. Shimada, A., Hatano, K., Tadehara, H., Yano, N., Shinzawa-Itoh, K., Yamashita, E., Muramoto, K., Tsukihara, T., Yoshikawa, S. J. Biol. Chem.
Header	Oxidoreductase
Released	2018-01-31
Resolution	1.850
CATH Insert Date	19 Aug, 2018

PDB Images (57)

5z84

PDB 5z84

5z84A

PDB Chain 5z84A

5z84B

PDB Chain 5z84B

5z84C

PDB Chain 5z84C

5z84D

PDB Chain 5z84D

5z84E

PDB Chain 5z84E

5z84F

PDB Chain 5z84F

5z84G

PDB Chain 5z84G

5z84H

PDB Chain 5z84H

5z84I

PDB Chain 5z84I

5z84J

PDB Chain 5z84J

5z84K

PDB Chain 5z84K

5z84L

PDB Chain 5z84L

5z84M

PDB Chain 5z84M

5z84N

PDB Chain 5z84N

5z84O

PDB Chain 5z84O

5z84P

PDB Chain 5z84P

5z84Q

PDB Chain 5z84Q

5z84R

PDB Chain 5z84R

5z84S

PDB Chain 5z84S

5z84T

PDB Chain 5z84T

5z84U

PDB Chain 5z84U

5z84V

PDB Chain 5z84V

5z84W

PDB Chain 5z84W

5z84X

PDB Chain 5z84X

5z84Y

PDB Chain 5z84Y

5z84Z

PDB Chain 5z84Z

5z84A00

CATH Domain 5z84A00

5z84B01

CATH Domain 5z84B01

5z84B02

CATH Domain 5z84B02

5z84C01

CATH Domain 5z84C01

5z84C02

CATH Domain 5z84C02

5z84D00

CATH Domain 5z84D00

5z84E00

CATH Domain 5z84E00

5z84F00

CATH Domain 5z84F00

5z84G00

CATH Domain 5z84G00

5z84H00

CATH Domain 5z84H00

5z84I00

CATH Domain 5z84I00

5z84J00

CATH Domain 5z84J00

5z84K00

CATH Domain 5z84K00

5z84L00

CATH Domain 5z84L00

5z84M00

CATH Domain 5z84M00

5z84N00

CATH Domain 5z84N00

5z84O01

CATH Domain 5z84O01

5z84O02

CATH Domain 5z84O02

5z84P01

CATH Domain 5z84P01

5z84P02

CATH Domain 5z84P02

5z84Q00

CATH Domain 5z84Q00

5z84R00

CATH Domain 5z84R00

5z84S00

CATH Domain 5z84S00

5z84T00

CATH Domain 5z84T00

5z84U00

CATH Domain 5z84U00

5z84V00

CATH Domain 5z84V00

5z84W00

CATH Domain 5z84W00

5z84X00

CATH Domain 5z84X00

5z84Y00

CATH Domain 5z84Y00

5z84Z00

CATH Domain 5z84Z00

PDB Prints

PDB Chains (26)

Chain ID	Date inserted into CATH	CATH Status
A	19 Aug, 2018	Chopped
B	19 Aug, 2018	Chopped
C	19 Aug, 2018	Chopped
D	19 Aug, 2018	Chopped
E	19 Aug, 2018	Chopped
F	19 Aug, 2018	Chopped
G	19 Aug, 2018	Chopped
H	19 Aug, 2018	Chopped
I	19 Aug, 2018	Chopped
J	19 Aug, 2018	Chopped
K	19 Aug, 2018	Chopped
L	19 Aug, 2018	Chopped
M	19 Aug, 2018	Chopped
N	19 Aug, 2018	Chopped
O	19 Aug, 2018	Chopped
P	19 Aug, 2018	Chopped
Q	19 Aug, 2018	Chopped
R	19 Aug, 2018	Chopped
S	19 Aug, 2018	Chopped
T	19 Aug, 2018	Chopped
U	19 Aug, 2018	Chopped
V	19 Aug, 2018	Chopped
W	19 Aug, 2018	Chopped
X	19 Aug, 2018	Chopped
Y	19 Aug, 2018	Chopped
Z	19 Aug, 2018	Chopped

CATH Domains (30)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5z84A00	20 Aug, 2018	1.20.210.10	Assigned
5z84B01	20 Aug, 2018	1.10.287.90	Assigned
5z84B02	20 Aug, 2018	2.60.40.420	Assigned
5z84C01	20 Aug, 2018	1.10.287.70	Assigned
5z84C02	20 Aug, 2018	1.20.120.80	Assigned
5z84D00	20 Aug, 2018	1.10.442.10	Assigned
5z84E00	20 Aug, 2018	1.25.40.40	Assigned
5z84F00	20 Aug, 2018	2.60.11.10	Assigned
5z84G00	20 Aug, 2018	4.10.95.10	Assigned
5z84H00	20 Aug, 2018	1.10.10.140	Assigned
5z84I00	20 Aug, 2018	4.10.93.10	Assigned
5z84J00	20 Aug, 2018	4.10.91.10	Assigned
5z84K00	20 Aug, 2018	4.10.51.10	Assigned
5z84L00	20 Aug, 2018	4.10.49.10	Assigned
5z84M00	20 Aug, 2018	4.10.81.10	Assigned
5z84N00	20 Aug, 2018	1.20.210.10	Assigned
5z84O01	20 Aug, 2018	1.10.287.90	Assigned
5z84O02	20 Aug, 2018	2.60.40.420	Assigned
5z84P01	20 Aug, 2018	1.10.287.70	Assigned
5z84P02	20 Aug, 2018	1.20.120.80	Assigned
5z84Q00	20 Aug, 2018	1.10.442.10	Assigned
5z84R00	20 Aug, 2018	1.25.40.40	Assigned
5z84S00	20 Aug, 2018	2.60.11.10	Assigned
5z84T00	20 Aug, 2018	4.10.95.10	Assigned
5z84U00	20 Aug, 2018	1.10.10.140	Assigned
5z84V00	20 Aug, 2018	4.10.93.10	Assigned
5z84W00	20 Aug, 2018	4.10.91.10	Assigned
5z84X00	20 Aug, 2018	4.10.51.10	Assigned
5z84Y00	20 Aug, 2018	4.10.49.10	Assigned
5z84Z00	20 Aug, 2018	4.10.81.10	Assigned

UniProtKB Entries (26)

Accession	Gene ID	Taxon	Description
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial