PDB 5ysh
PDB Information
| PDB | 5YSH |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli BL21 |
| Gene Source | Klebsiella oxytoca |
| Primary Citation | Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12Catalysis.
Angew. Chem. Int. Ed. Engl.
|
| Header | Lyase |
| Released | 2017-11-14 |
| Resolution | 1.900 |
| CATH Insert Date | 23 Sep, 2018 |
PDB Images (29)
5ysh
PDB 5ysh
5yshA
PDB Chain 5yshA
5yshB
PDB Chain 5yshB
5yshC
PDB Chain 5yshC
5yshD
PDB Chain 5yshD
5yshE
PDB Chain 5yshE
5yshF
PDB Chain 5yshF
5yshG
PDB Chain 5yshG
5yshH
PDB Chain 5yshH
5yshI
PDB Chain 5yshI
5yshJ
PDB Chain 5yshJ
5yshK
PDB Chain 5yshK
5yshL
PDB Chain 5yshL
5yshA00
CATH Domain 5yshA00
5yshB00
CATH Domain 5yshB00
5yshC01
CATH Domain 5yshC01
5yshC02
CATH Domain 5yshC02
5yshD00
CATH Domain 5yshD00
5yshE00
CATH Domain 5yshE00
5yshF01
CATH Domain 5yshF01
5yshF02
CATH Domain 5yshF02
5yshG00
CATH Domain 5yshG00
5yshH00
CATH Domain 5yshH00
5yshI01
CATH Domain 5yshI01
5yshI02
CATH Domain 5yshI02
5yshJ00
CATH Domain 5yshJ00
5yshK00
CATH Domain 5yshK00
5yshL01
CATH Domain 5yshL01
5yshL02
CATH Domain 5yshL02
PDB Prints
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 23 Sep, 2018 | Chopped |
| B | 23 Sep, 2018 | Chopped |
| C | 23 Sep, 2018 | Chopped |
| D | 23 Sep, 2018 | Chopped |
| E | 23 Sep, 2018 | Chopped |
| F | 23 Sep, 2018 | Chopped |
| G | 23 Sep, 2018 | Chopped |
| H | 23 Sep, 2018 | Chopped |
| I | 23 Sep, 2018 | Chopped |
| J | 23 Sep, 2018 | Chopped |
| K | 23 Sep, 2018 | Chopped |
| L | 23 Sep, 2018 | Chopped |
CATH Domains (16)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5yshA00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yshB00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yshC01 | 24 Sep, 2018 | Holding pen | |
| 5yshC02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yshD00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yshE00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yshF01 | 24 Sep, 2018 | Holding pen | |
| 5yshF02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yshG00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yshH00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yshI01 | 24 Sep, 2018 | Holding pen | |
| 5yshI02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yshJ00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yshK00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yshL01 | 24 Sep, 2018 | Holding pen | |
| 5yshL02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
UniProtKB Entries (12)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |