PDB 5yrv
PDB Information
| PDB | 5YRV |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli BL21 |
| Gene Source | Klebsiella oxytoca |
| Primary Citation | Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12Catalysis.
Angew. Chem. Int. Ed. Engl.
|
| Header | Lyase |
| Released | 2017-11-10 |
| Resolution | 1.550 |
| CATH Insert Date | 23 Sep, 2018 |
PDB Images (29)
5yrv
PDB 5yrv
5yrvA
PDB Chain 5yrvA
5yrvB
PDB Chain 5yrvB
5yrvC
PDB Chain 5yrvC
5yrvD
PDB Chain 5yrvD
5yrvE
PDB Chain 5yrvE
5yrvF
PDB Chain 5yrvF
5yrvG
PDB Chain 5yrvG
5yrvH
PDB Chain 5yrvH
5yrvI
PDB Chain 5yrvI
5yrvJ
PDB Chain 5yrvJ
5yrvK
PDB Chain 5yrvK
5yrvL
PDB Chain 5yrvL
5yrvA00
CATH Domain 5yrvA00
5yrvB00
CATH Domain 5yrvB00
5yrvC01
CATH Domain 5yrvC01
5yrvC02
CATH Domain 5yrvC02
5yrvD00
CATH Domain 5yrvD00
5yrvE00
CATH Domain 5yrvE00
5yrvF01
CATH Domain 5yrvF01
5yrvF02
CATH Domain 5yrvF02
5yrvG00
CATH Domain 5yrvG00
5yrvH00
CATH Domain 5yrvH00
5yrvI01
CATH Domain 5yrvI01
5yrvI02
CATH Domain 5yrvI02
5yrvJ00
CATH Domain 5yrvJ00
5yrvK00
CATH Domain 5yrvK00
5yrvL01
CATH Domain 5yrvL01
5yrvL02
CATH Domain 5yrvL02
PDB Prints
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 23 Sep, 2018 | Chopped |
| B | 23 Sep, 2018 | Chopped |
| C | 23 Sep, 2018 | Chopped |
| D | 23 Sep, 2018 | Chopped |
| E | 23 Sep, 2018 | Chopped |
| F | 23 Sep, 2018 | Chopped |
| G | 23 Sep, 2018 | Chopped |
| H | 23 Sep, 2018 | Chopped |
| I | 23 Sep, 2018 | Chopped |
| J | 23 Sep, 2018 | Chopped |
| K | 23 Sep, 2018 | Chopped |
| L | 23 Sep, 2018 | Chopped |
CATH Domains (16)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5yrvA00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yrvB00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yrvC01 | 24 Sep, 2018 | Holding pen | |
| 5yrvC02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yrvD00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yrvE00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yrvF01 | 24 Sep, 2018 | Holding pen | |
| 5yrvF02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yrvG00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yrvH00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yrvI01 | 24 Sep, 2018 | Holding pen | |
| 5yrvI02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
| 5yrvJ00 | 24 Sep, 2018 | 3.20.20.350 | Assigned |
| 5yrvK00 | 24 Sep, 2018 | 3.40.50.10150 | Assigned |
| 5yrvL01 | 24 Sep, 2018 | Holding pen | |
| 5yrvL02 | 24 Sep, 2018 | 1.10.1510.20 | Assigned |
UniProtKB Entries (12)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59471 | Q59471_KLEOX | Klebsiella oxytoca | Diol dehydrase beta subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |
| Q59470 | Q59470_KLEOX | Klebsiella oxytoca | Diol dehydrase alpha subunit |
| Q59472 | Q59472_KLEOX | Klebsiella oxytoca | Diol dehydrase gamma subunit |