PDB 5ypf

PDB Links
Overview

PDB Information

PDB	5YPF
Method	X-RAY DIFFRACTION
Host Organism	Escherichia coli BL21(DE3)
Gene Source	Homo sapiens
Primary Citation	Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter. Kwon, D.H., Park, O.H., Kim, L., Jung, Y.O., Park, Y., Jeong, H., Hyun, J., Kim, Y.K., Song, H.K. Nat Commun
Header	Signaling Protein
Released	2017-11-01
Resolution	2.950
CATH Insert Date	02 Sep, 2018

PDB Images (9)

Image of CATH 5ypf

5ypf

PDB 5ypf

Image of CATH 5ypfA

5ypfA

PDB Chain 5ypfA

Image of CATH 5ypfB

5ypfB

PDB Chain 5ypfB

Image of CATH 5ypfC

5ypfC

PDB Chain 5ypfC

Image of CATH 5ypfD

5ypfD

PDB Chain 5ypfD

Image of CATH 5ypfA00

5ypfA00

CATH Domain 5ypfA00

Image of CATH 5ypfB00

5ypfB00

CATH Domain 5ypfB00

Image of CATH 5ypfC00

5ypfC00

CATH Domain 5ypfC00

Image of CATH 5ypfD00

5ypfD00

CATH Domain 5ypfD00

PDB Prints

PDB Chains (4)

Chain ID	Date inserted into CATH	CATH Status
A	02 Sep, 2018	Chopped
B	02 Sep, 2018	Chopped
C	02 Sep, 2018	Chopped
D	02 Sep, 2018	Chopped

CATH Domains (4)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5ypfA00	03 Sep, 2018		Holding pen
5ypfB00	03 Sep, 2018		Holding pen
5ypfC00	03 Sep, 2018		Holding pen
5ypfD00	03 Sep, 2018		Holding pen

UniProtKB Entries (8)

Accession	Gene ID	Taxon	Description
P11021	BIP_HUMAN	Homo sapiens	Endoplasmic reticulum chaperone BiP
Q13501	SQSTM_HUMAN	Homo sapiens	Sequestosome-1
Q13501	SQSTM_HUMAN	Homo sapiens	Sequestosome-1
P11021	BIP_HUMAN	Homo sapiens	Endoplasmic reticulum chaperone BiP
P11021	BIP_HUMAN	Homo sapiens	Endoplasmic reticulum chaperone BiP
Q13501	SQSTM_HUMAN	Homo sapiens	Sequestosome-1
Q13501	SQSTM_HUMAN	Homo sapiens	Sequestosome-1
P11021	BIP_HUMAN	Homo sapiens	Endoplasmic reticulum chaperone BiP