PDB 5xyu
PDB Information
| PDB | 5XYU |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.
Protein Cell
|
| Header | Ribosome |
| Released | 2017-07-10 |
| Resolution | 3.450 |
| CATH Insert Date | 14 Nov, 2017 |
PDB Images (39)
5xyu
PDB 5xyu
5xyuA
PDB Chain 5xyuA
5xyuC
PDB Chain 5xyuC
5xyuD
PDB Chain 5xyuD
5xyuE
PDB Chain 5xyuE
5xyuF
PDB Chain 5xyuF
5xyuG
PDB Chain 5xyuG
5xyuH
PDB Chain 5xyuH
5xyuI
PDB Chain 5xyuI
5xyuJ
PDB Chain 5xyuJ
5xyuK
PDB Chain 5xyuK
5xyuL
PDB Chain 5xyuL
5xyuM
PDB Chain 5xyuM
5xyuN
PDB Chain 5xyuN
5xyuO
PDB Chain 5xyuO
5xyuP
PDB Chain 5xyuP
5xyuQ
PDB Chain 5xyuQ
5xyuR
PDB Chain 5xyuR
5xyuS
PDB Chain 5xyuS
5xyuT
PDB Chain 5xyuT
5xyuU
PDB Chain 5xyuU
5xyuC01
CATH Domain 5xyuC01
5xyuC02
CATH Domain 5xyuC02
5xyuF00
CATH Domain 5xyuF00
5xyuH01
CATH Domain 5xyuH01
5xyuH02
CATH Domain 5xyuH02
5xyuI00
CATH Domain 5xyuI00
5xyuJ00
CATH Domain 5xyuJ00
5xyuK00
CATH Domain 5xyuK00
5xyuL00
CATH Domain 5xyuL00
5xyuM01
CATH Domain 5xyuM01
5xyuM02
CATH Domain 5xyuM02
5xyuN00
CATH Domain 5xyuN00
5xyuO00
CATH Domain 5xyuO00
5xyuP00
CATH Domain 5xyuP00
5xyuQ00
CATH Domain 5xyuQ00
5xyuR00
CATH Domain 5xyuR00
5xyuS00
CATH Domain 5xyuS00
5xyuT00
CATH Domain 5xyuT00
PDB Prints
PDB Chains (20)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 14 Nov, 2017 | Rejected |
| C | 14 Nov, 2017 | Chopped |
| D | 14 Nov, 2017 | Domchop review |
| E | 14 Nov, 2017 | Holding pen |
| F | 14 Nov, 2017 | Chopped |
| G | 14 Nov, 2017 | Holding pen |
| H | 14 Nov, 2017 | Chopped |
| I | 14 Nov, 2017 | Chopped |
| J | 14 Nov, 2017 | Chopped |
| K | 14 Nov, 2017 | Chopped |
| L | 14 Nov, 2017 | Chopped |
| M | 14 Nov, 2017 | Chopped |
| N | 14 Nov, 2017 | Chopped |
| O | 14 Nov, 2017 | Chopped |
| P | 14 Nov, 2017 | Chopped |
| Q | 14 Nov, 2017 | Chopped |
| R | 14 Nov, 2017 | Chopped |
| S | 14 Nov, 2017 | Chopped |
| T | 14 Nov, 2017 | Chopped |
| U | 14 Nov, 2017 | Rejected |
CATH Domains (18)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5xyuC01 | 10 Dec, 2017 | 3.30.300.20 | Assigned |
| 5xyuC02 | 10 Dec, 2017 | 3.30.1140.32 | Assigned |
| 5xyuF00 | 21 Feb, 2018 | Holding pen | |
| 5xyuH01 | 10 Dec, 2017 | 3.30.1370.30 | Assigned |
| 5xyuH02 | 10 Dec, 2017 | 3.30.1490.10 | Assigned |
| 5xyuI00 | 14 Dec, 2017 | 3.30.230.10 | Assigned |
| 5xyuJ00 | 10 Dec, 2017 | 3.30.70.600 | Assigned |
| 5xyuK00 | 10 Dec, 2017 | 3.30.420.80 | Assigned |
| 5xyuL00 | 10 Dec, 2017 | 2.40.50.140 | Assigned |
| 5xyuM01 | 10 Dec, 2017 | 1.10.8.50 | Assigned |
| 5xyuM02 | 10 Dec, 2017 | 4.10.910.10 | Assigned |
| 5xyuN00 | 10 Dec, 2017 | 4.10.830.10 | Assigned |
| 5xyuO00 | 10 Dec, 2017 | Holding pen | |
| 5xyuP00 | 16 Dec, 2017 | Holding pen | |
| 5xyuQ00 | 16 Dec, 2017 | 2.40.50.140 | Assigned |
| 5xyuR00 | 10 Dec, 2017 | 4.10.640.10 | Assigned |
| 5xyuS00 | 10 Dec, 2017 | 3.30.860.10 | Assigned |
| 5xyuT00 | 10 Dec, 2017 | 1.20.58.110 | Assigned |
UniProtKB Entries (18)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| A0QSL7 | RS4_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S4 |
| A0QSG2 | RS14Z_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S14 type Z |
| A0QSE0 | RS17_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S17 |
| A0QSL5 | RS13_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S13 |
| A0QV37 | RS16_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S16 |
| A0R7F9 | RS6_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S6 |
| A0R7F7 | RS182_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S18 2 |
| A0QS96 | RS12_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S12 |
| A0QSG3 | RS8_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S8 |
| A0QS97 | RS7_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S7 |
| A0QVQ3 | RS15_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S15 |
| A0QSG6 | RS5_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S5 |
| A0QSD0 | RS10_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S10 |
| A0QSD7 | RS3_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S3 |
| A0QSL6 | RS11_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S11 |
| A0QSP9 | RS9_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S9 |
| A0QSD5 | RS19_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S19 |
| A0R102 | RS20_MYCS2 | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S20 |
