PDB 5wq8

PDB Links
Overview

PDB Information

PDB	5WQ8
Method	ELECTRON MICROSCOPY
Host Organism	Escherichia coli K-12
Gene Source	Vibrio cholerae O1 biovar El Tor str. N16961
Primary Citation	Structural insights into the secretin translocation channel in the type II secretion system Yan, Z., Yin, M., Xu, D., Zhu, Y., Li, X. Nat. Struct. Mol. Biol.
Header	Protein Transport
Released	2016-11-23
Resolution	3.260
CATH Insert Date	08 Jan, 2017

PDB Images (76)

5wq8

PDB 5wq8

5wq8A

PDB Chain 5wq8A

5wq8B

PDB Chain 5wq8B

5wq8C

PDB Chain 5wq8C

5wq8D

PDB Chain 5wq8D

5wq8E

PDB Chain 5wq8E

5wq8F

PDB Chain 5wq8F

5wq8G

PDB Chain 5wq8G

5wq8H

PDB Chain 5wq8H

5wq8I

PDB Chain 5wq8I

5wq8J

PDB Chain 5wq8J

5wq8K

PDB Chain 5wq8K

5wq8L

PDB Chain 5wq8L

5wq8M

PDB Chain 5wq8M

5wq8N

PDB Chain 5wq8N

5wq8O

PDB Chain 5wq8O

5wq8A01

CATH Domain 5wq8A01

5wq8A02

CATH Domain 5wq8A02

5wq8A03

CATH Domain 5wq8A03

5wq8A04

CATH Domain 5wq8A04

5wq8B01

CATH Domain 5wq8B01

5wq8B02

CATH Domain 5wq8B02

5wq8B03

CATH Domain 5wq8B03

5wq8B04

CATH Domain 5wq8B04

5wq8C01

CATH Domain 5wq8C01

5wq8C02

CATH Domain 5wq8C02

5wq8C03

CATH Domain 5wq8C03

5wq8C04

CATH Domain 5wq8C04

5wq8D01

CATH Domain 5wq8D01

5wq8D02

CATH Domain 5wq8D02

5wq8D03

CATH Domain 5wq8D03

5wq8D04

CATH Domain 5wq8D04

5wq8E01

CATH Domain 5wq8E01

5wq8E02

CATH Domain 5wq8E02

5wq8E03

CATH Domain 5wq8E03

5wq8E04

CATH Domain 5wq8E04

5wq8F01

CATH Domain 5wq8F01

5wq8F02

CATH Domain 5wq8F02

5wq8F03

CATH Domain 5wq8F03

5wq8F04

CATH Domain 5wq8F04

5wq8G01

CATH Domain 5wq8G01

5wq8G02

CATH Domain 5wq8G02

5wq8G03

CATH Domain 5wq8G03

5wq8G04

CATH Domain 5wq8G04

5wq8H01

CATH Domain 5wq8H01

5wq8H02

CATH Domain 5wq8H02

5wq8H03

CATH Domain 5wq8H03

5wq8H04

CATH Domain 5wq8H04

5wq8I01

CATH Domain 5wq8I01

5wq8I02

CATH Domain 5wq8I02

5wq8I03

CATH Domain 5wq8I03

5wq8I04

CATH Domain 5wq8I04

5wq8J01

CATH Domain 5wq8J01

5wq8J02

CATH Domain 5wq8J02

5wq8J03

CATH Domain 5wq8J03

5wq8J04

CATH Domain 5wq8J04

5wq8K01

CATH Domain 5wq8K01

5wq8K02

CATH Domain 5wq8K02

5wq8K03

CATH Domain 5wq8K03

5wq8K04

CATH Domain 5wq8K04

5wq8L01

CATH Domain 5wq8L01

5wq8L02

CATH Domain 5wq8L02

5wq8L03

CATH Domain 5wq8L03

5wq8L04

CATH Domain 5wq8L04

5wq8M01

CATH Domain 5wq8M01

5wq8M02

CATH Domain 5wq8M02

5wq8M03

CATH Domain 5wq8M03

5wq8M04

CATH Domain 5wq8M04

5wq8N01

CATH Domain 5wq8N01

5wq8N02

CATH Domain 5wq8N02

5wq8N03

CATH Domain 5wq8N03

5wq8N04

CATH Domain 5wq8N04

5wq8O01

CATH Domain 5wq8O01

5wq8O02

CATH Domain 5wq8O02

5wq8O03

CATH Domain 5wq8O03

5wq8O04

CATH Domain 5wq8O04

PDB Prints

PDB Chains (15)

Chain ID	Date inserted into CATH	CATH Status
A	09 Jan, 2017	Chopped
B	09 Jan, 2017	Chopped
C	09 Jan, 2017	Chopped
D	09 Jan, 2017	Chopped
E	09 Jan, 2017	Chopped
F	09 Jan, 2017	Chopped
G	09 Jan, 2017	Chopped
H	09 Jan, 2017	Chopped
I	09 Jan, 2017	Chopped
J	09 Jan, 2017	Chopped
K	09 Jan, 2017	Chopped
L	09 Jan, 2017	Chopped
M	09 Jan, 2017	Chopped
N	09 Jan, 2017	Chopped
O	09 Jan, 2017	Chopped

CATH Domains (60)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5wq8A01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8A02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8A03	12 Dec, 2017		Holding pen
5wq8A04	12 Dec, 2017		Holding pen
5wq8B01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8B02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8B03	12 Dec, 2017		Holding pen
5wq8B04	12 Dec, 2017		Holding pen
5wq8C01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8C02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8C03	12 Dec, 2017		Holding pen
5wq8C04	12 Dec, 2017		Holding pen
5wq8D01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8D02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8D03	12 Dec, 2017		Holding pen
5wq8D04	12 Dec, 2017		Holding pen
5wq8E01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8E02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8E03	12 Dec, 2017		Holding pen
5wq8E04	12 Dec, 2017		Holding pen
5wq8F01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8F02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8F03	12 Dec, 2017		Holding pen
5wq8F04	12 Dec, 2017		Holding pen
5wq8G01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8G02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8G03	12 Dec, 2017		Holding pen
5wq8G04	12 Dec, 2017		Holding pen
5wq8H01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8H02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8H03	12 Dec, 2017		Holding pen
5wq8H04	12 Dec, 2017		Holding pen
5wq8I01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8I02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8I03	12 Dec, 2017		Holding pen
5wq8I04	12 Dec, 2017		Holding pen
5wq8J01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8J02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8J03	12 Dec, 2017		Holding pen
5wq8J04	12 Dec, 2017		Holding pen
5wq8K01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8K02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8K03	12 Dec, 2017		Holding pen
5wq8K04	12 Dec, 2017		Holding pen
5wq8L01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8L02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8L03	12 Dec, 2017		Holding pen
5wq8L04	12 Dec, 2017		Holding pen
5wq8M01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8M02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8M03	12 Dec, 2017		Holding pen
5wq8M04	12 Dec, 2017		Holding pen
5wq8N01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8N02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8N03	12 Dec, 2017		Holding pen
5wq8N04	12 Dec, 2017		Holding pen
5wq8O01	12 Dec, 2017	3.30.1370.120	Assigned
5wq8O02	12 Dec, 2017	3.30.1370.120	Assigned
5wq8O03	12 Dec, 2017		Holding pen
5wq8O04	12 Dec, 2017		Holding pen

UniProtKB Entries (15)

Accession	Gene ID	Taxon	Description
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD
P45779	GSPD_VIBCH	Vibrio cholerae O1 biovar El Tor str. N16961	Secretin GspD