PDB 5vqm
PDB Information
PDB | 5VQM |
Method | X-RAY DIFFRACTION |
Host Organism | Bacillus megaterium |
Gene Source | Peptoclostridium difficile |
Primary Citation | A neutralizing antibody that blocks delivery of the enzymatic cargo of Clostridium difficile toxin TcdB into host cells.
J. Biol. Chem.
|
Header | Toxin/Immune System |
Released | 2017-05-09 |
Resolution | 2.790 |
CATH Insert Date | 17 Dec, 2017 |
PDB Images (21)
PDB Prints
PDB Chains (6)
Chain ID | Date inserted into CATH | CATH Status |
---|---|---|
A | 17 Dec, 2017 | Chopped |
B | 17 Dec, 2017 | Chopped |
C | 17 Dec, 2017 | Chopped |
D | 17 Dec, 2017 | Chopped |
H | 17 Dec, 2017 | Chopped |
L | 17 Dec, 2017 | Chopped |
CATH Domains (14)
Domain ID | Date inserted into CATH | Superfamily | CATH Status |
---|---|---|---|
5vqmA01 | 22 Dec, 2017 | 1.20.58.1190 | Assigned |
5vqmA02 | 22 Dec, 2017 | Holding pen | |
5vqmA03 | 22 Dec, 2017 | 1.10.10.1780 | Assigned |
5vqmB01 | 22 Dec, 2017 | 1.20.58.1190 | Assigned |
5vqmB02 | 22 Dec, 2017 | Holding pen | |
5vqmB03 | 22 Dec, 2017 | 1.10.10.1780 | Assigned |
5vqmC01 | 23 Mar, 2018 | 2.60.40.10 | Assigned |
5vqmC02 | 23 Mar, 2018 | 2.60.40.10 | Assigned |
5vqmD01 | 22 Dec, 2017 | Holding pen | |
5vqmD02 | 22 Dec, 2017 | 2.60.40.10 | Assigned |
5vqmH01 | 22 Dec, 2017 | Holding pen | |
5vqmH02 | 22 Dec, 2017 | 2.60.40.10 | Assigned |
5vqmL01 | 23 Mar, 2018 | 2.60.40.10 | Assigned |
5vqmL02 | 23 Mar, 2018 | 2.60.40.10 | Assigned |
UniProtKB Entries (6)
Accession | Gene ID | Taxon | Description |
---|---|---|---|
C9YJ35 | C9YJ35_PEPDR | Clostridioides difficile R20291 | Toxin B |
S6B291 | S6B291_HUMAN | Homo sapiens | IgG H chain |
C9YJ35 | C9YJ35_PEPDR | Clostridioides difficile R20291 | Toxin B |
Q8TCD0 | Q8TCD0_HUMAN | Homo sapiens | Uncharacterized protein |
S6B291 | S6B291_HUMAN | Homo sapiens | IgG H chain |
Q8TCD0 | Q8TCD0_HUMAN | Homo sapiens | Uncharacterized protein |