PDB 5uk4

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Overview

PDB Information

PDB	5UK4
Method	X-RAY DIFFRACTION
Host Organism	Escherichia coli
Gene Source	Vesicular stomatitis Indiana virus (strain San Juan)
Primary Citation	Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication. Hanke, L., Schmidt, F.I., Knockenhauer, K.E., Morin, B., Whelan, S.P., Schwartz, T.U., Ploegh, H.L. EMBO Rep.
Header	Viral Protein/Rna/Immune System
Released	2017-01-19
Resolution	3.200
CATH Insert Date	07 May, 2017

PDB Images (105)

5uk4

PDB 5uk4

5uk4a

PDB Chain 5uk4a

5uk4A

PDB Chain 5uk4A

5uk4b

PDB Chain 5uk4b

5uk4B

PDB Chain 5uk4B

5uk4c

PDB Chain 5uk4c

5uk4C

PDB Chain 5uk4C

5uk4d

PDB Chain 5uk4d

5uk4D

PDB Chain 5uk4D

5uk4e

PDB Chain 5uk4e

5uk4E

PDB Chain 5uk4E

5uk4f

PDB Chain 5uk4f

5uk4F

PDB Chain 5uk4F

5uk4g

PDB Chain 5uk4g

5uk4G

PDB Chain 5uk4G

5uk4h

PDB Chain 5uk4h

5uk4H

PDB Chain 5uk4H

5uk4i

PDB Chain 5uk4i

5uk4I

PDB Chain 5uk4I

5uk4j

PDB Chain 5uk4j

5uk4J

PDB Chain 5uk4J

5uk4k

PDB Chain 5uk4k

5uk4K

PDB Chain 5uk4K

5uk4l

PDB Chain 5uk4l

5uk4L

PDB Chain 5uk4L

5uk4m

PDB Chain 5uk4m

5uk4M

PDB Chain 5uk4M

5uk4n

PDB Chain 5uk4n

5uk4N

PDB Chain 5uk4N

5uk4o

PDB Chain 5uk4o

5uk4O

PDB Chain 5uk4O

5uk4p

PDB Chain 5uk4p

5uk4P

PDB Chain 5uk4P

5uk4q

PDB Chain 5uk4q

5uk4Q

PDB Chain 5uk4Q

5uk4r

PDB Chain 5uk4r

5uk4R

PDB Chain 5uk4R

5uk4s

PDB Chain 5uk4s

5uk4S

PDB Chain 5uk4S

5uk4t

PDB Chain 5uk4t

5uk4T

PDB Chain 5uk4T

5uk4u

PDB Chain 5uk4u

5uk4v

PDB Chain 5uk4v

5uk4w

PDB Chain 5uk4w

5uk4x

PDB Chain 5uk4x

5uk4a00

CATH Domain 5uk4a00

5uk4A01

CATH Domain 5uk4A01

5uk4A02

CATH Domain 5uk4A02

5uk4b00

CATH Domain 5uk4b00

5uk4B01

CATH Domain 5uk4B01

5uk4B02

CATH Domain 5uk4B02

5uk4c00

CATH Domain 5uk4c00

5uk4C01

CATH Domain 5uk4C01

5uk4C02

CATH Domain 5uk4C02

5uk4d00

CATH Domain 5uk4d00

5uk4D01

CATH Domain 5uk4D01

5uk4D02

CATH Domain 5uk4D02

5uk4e00

CATH Domain 5uk4e00

5uk4E01

CATH Domain 5uk4E01

5uk4E02

CATH Domain 5uk4E02

5uk4f00

CATH Domain 5uk4f00

5uk4F01

CATH Domain 5uk4F01

5uk4F02

CATH Domain 5uk4F02

5uk4g00

CATH Domain 5uk4g00

5uk4G01

CATH Domain 5uk4G01

5uk4G02

CATH Domain 5uk4G02

5uk4h00

CATH Domain 5uk4h00

5uk4H01

CATH Domain 5uk4H01

5uk4H02

CATH Domain 5uk4H02

5uk4i00

CATH Domain 5uk4i00

5uk4I01

CATH Domain 5uk4I01

5uk4I02

CATH Domain 5uk4I02

5uk4j00

CATH Domain 5uk4j00

5uk4J01

CATH Domain 5uk4J01

5uk4J02

CATH Domain 5uk4J02

5uk4k00

CATH Domain 5uk4k00

5uk4K01

CATH Domain 5uk4K01

5uk4K02

CATH Domain 5uk4K02

5uk4l00

CATH Domain 5uk4l00

5uk4L01

CATH Domain 5uk4L01

5uk4L02

CATH Domain 5uk4L02

5uk4m00

CATH Domain 5uk4m00

5uk4M01

CATH Domain 5uk4M01

5uk4M02

CATH Domain 5uk4M02

5uk4n00

CATH Domain 5uk4n00

5uk4N01

CATH Domain 5uk4N01

5uk4N02

CATH Domain 5uk4N02

5uk4o00

CATH Domain 5uk4o00

5uk4O01

CATH Domain 5uk4O01

5uk4O02

CATH Domain 5uk4O02

5uk4p00

CATH Domain 5uk4p00

5uk4P01

CATH Domain 5uk4P01

5uk4P02

CATH Domain 5uk4P02

5uk4q00

CATH Domain 5uk4q00

5uk4Q01

CATH Domain 5uk4Q01

5uk4Q02

CATH Domain 5uk4Q02

5uk4r00

CATH Domain 5uk4r00

5uk4R01

CATH Domain 5uk4R01

5uk4R02

CATH Domain 5uk4R02

5uk4s00

CATH Domain 5uk4s00

5uk4S01

CATH Domain 5uk4S01

5uk4S02

CATH Domain 5uk4S02

5uk4t00

CATH Domain 5uk4t00

5uk4T01

CATH Domain 5uk4T01

5uk4T02

CATH Domain 5uk4T02

PDB Prints

PDB Chains (44)

Chain ID	Date inserted into CATH	CATH Status
a	08 May, 2017	Chopped
A	08 May, 2017	Chopped
b	08 May, 2017	Chopped
B	08 May, 2017	Chopped
c	08 May, 2017	Chopped
C	08 May, 2017	Chopped
d	08 May, 2017	Chopped
D	08 May, 2017	Chopped
e	08 May, 2017	Chopped
E	08 May, 2017	Chopped
f	08 May, 2017	Chopped
F	08 May, 2017	Chopped
g	08 May, 2017	Chopped
G	08 May, 2017	Chopped
h	08 May, 2017	Chopped
H	08 May, 2017	Chopped
i	08 May, 2017	Chopped
I	08 May, 2017	Chopped
j	08 May, 2017	Chopped
J	08 May, 2017	Chopped
k	08 May, 2017	Chopped
K	08 May, 2017	Chopped
l	08 May, 2017	Chopped
L	08 May, 2017	Chopped
m	08 May, 2017	Chopped
M	08 May, 2017	Chopped
n	08 May, 2017	Chopped
N	08 May, 2017	Chopped
o	08 May, 2017	Chopped
O	08 May, 2017	Chopped
p	08 May, 2017	Chopped
P	08 May, 2017	Chopped
q	08 May, 2017	Chopped
Q	08 May, 2017	Chopped
r	08 May, 2017	Chopped
R	08 May, 2017	Chopped
s	08 May, 2017	Chopped
S	08 May, 2017	Chopped
t	08 May, 2017	Chopped
T	08 May, 2017	Chopped
u	08 May, 2017	Rejected
v	08 May, 2017	Rejected
w	08 May, 2017	Rejected
x	08 May, 2017	Rejected

CATH Domains (60)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5uk4a00	25 May, 2017	2.60.40.10	Assigned
5uk4A01	25 May, 2017	1.10.3570.10	Assigned
5uk4A02	25 May, 2017	1.10.3610.10	Assigned
5uk4b00	25 May, 2017	2.60.40.10	Assigned
5uk4B01	25 May, 2017	1.10.3570.10	Assigned
5uk4B02	25 May, 2017	1.10.3610.10	Assigned
5uk4c00	25 May, 2017	2.60.40.10	Assigned
5uk4C01	25 May, 2017	1.10.3570.10	Assigned
5uk4C02	25 May, 2017	1.10.3610.10	Assigned
5uk4d00	25 May, 2017	2.60.40.10	Assigned
5uk4D01	25 May, 2017	1.10.3570.10	Assigned
5uk4D02	25 May, 2017	1.10.3610.10	Assigned
5uk4e00	25 May, 2017	2.60.40.10	Assigned
5uk4E01	25 May, 2017	1.10.3570.10	Assigned
5uk4E02	25 May, 2017	1.10.3610.10	Assigned
5uk4f00	25 May, 2017	2.60.40.10	Assigned
5uk4F01	25 May, 2017	1.10.3570.10	Assigned
5uk4F02	25 May, 2017	1.10.3610.10	Assigned
5uk4g00	25 May, 2017	2.60.40.10	Assigned
5uk4G01	25 May, 2017	1.10.3570.10	Assigned
5uk4G02	25 May, 2017	1.10.3610.10	Assigned
5uk4h00	25 May, 2017	2.60.40.10	Assigned
5uk4H01	25 May, 2017	1.10.3570.10	Assigned
5uk4H02	25 May, 2017	1.10.3610.10	Assigned
5uk4i00	25 May, 2017	2.60.40.10	Assigned
5uk4I01	25 May, 2017	1.10.3570.10	Assigned
5uk4I02	25 May, 2017	1.10.3610.10	Assigned
5uk4j00	25 May, 2017	2.60.40.10	Assigned
5uk4J01	25 May, 2017	1.10.3570.10	Assigned
5uk4J02	25 May, 2017	1.10.3610.10	Assigned
5uk4k00	25 May, 2017	2.60.40.10	Assigned
5uk4K01	25 May, 2017	1.10.3570.10	Assigned
5uk4K02	25 May, 2017	1.10.3610.10	Assigned
5uk4l00	25 May, 2017	2.60.40.10	Assigned
5uk4L01	25 May, 2017	1.10.3570.10	Assigned
5uk4L02	25 May, 2017	1.10.3610.10	Assigned
5uk4m00	25 May, 2017	2.60.40.10	Assigned
5uk4M01	25 May, 2017	1.10.3570.10	Assigned
5uk4M02	25 May, 2017	1.10.3610.10	Assigned
5uk4n00	25 May, 2017	2.60.40.10	Assigned
5uk4N01	25 May, 2017	1.10.3570.10	Assigned
5uk4N02	25 May, 2017	1.10.3610.10	Assigned
5uk4o00	25 May, 2017	2.60.40.10	Assigned
5uk4O01	25 May, 2017	1.10.3570.10	Assigned
5uk4O02	25 May, 2017	1.10.3610.10	Assigned
5uk4p00	25 May, 2017	2.60.40.10	Assigned
5uk4P01	25 May, 2017	1.10.3570.10	Assigned
5uk4P02	25 May, 2017	1.10.3610.10	Assigned
5uk4q00	25 May, 2017	2.60.40.10	Assigned
5uk4Q01	25 May, 2017	1.10.3570.10	Assigned
5uk4Q02	25 May, 2017	1.10.3610.10	Assigned
5uk4r00	25 May, 2017	2.60.40.10	Assigned
5uk4R01	25 May, 2017	1.10.3570.10	Assigned
5uk4R02	25 May, 2017	1.10.3610.10	Assigned
5uk4s00	25 May, 2017	2.60.40.10	Assigned
5uk4S01	25 May, 2017	1.10.3570.10	Assigned
5uk4S02	25 May, 2017	1.10.3610.10	Assigned
5uk4t00	25 May, 2017	2.60.40.10	Assigned
5uk4T01	25 May, 2017	1.10.3570.10	Assigned
5uk4T02	25 May, 2017	1.10.3610.10	Assigned

UniProtKB Entries (40)

Accession	Gene ID	Taxon	Description
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
A0A192B6J6	A0A192B6J6_VICPA	Vicugna pacos	Anti-vesicular stomatitis virus N VHH
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein
P03521	NCAP_VSIVA	Vesicular stomatitis Indiana virus strain San Juan	Nucleoprotein