PDB 5mps
PDB Information
| PDB | 5MPS |
| Method | ELECTRON MICROSCOPY |
| Host Organism | in vitro transcription vector pT7-Fluc(deltai) |
| Gene Source | Saccharomyces cerevisiae |
| Primary Citation | Structure of a spliceosome remodelled for exon ligation.
Nature
|
| Header | Splicing |
| Released | 2016-12-18 |
| Resolution | 3.850 |
| CATH Insert Date | 07 May, 2017 |
PDB Images (44)
5mps
PDB 5mps
5mps2
PDB Chain 5mps2
5mps5
PDB Chain 5mps5
5mps6
PDB Chain 5mps6
5mpsa
PDB Chain 5mpsa
5mpsA
PDB Chain 5mpsA
5mpsb
PDB Chain 5mpsb
5mpsc
PDB Chain 5mpsc
5mpsC
PDB Chain 5mpsC
5mpsd
PDB Chain 5mpsd
5mpse
PDB Chain 5mpse
5mpsE
PDB Chain 5mpsE
5mpsf
PDB Chain 5mpsf
5mpsg
PDB Chain 5mpsg
5mpsh
PDB Chain 5mpsh
5mpsH
PDB Chain 5mpsH
5mpsI
PDB Chain 5mpsI
5mpsj
PDB Chain 5mpsj
5mpsJ
PDB Chain 5mpsJ
5mpsK
PDB Chain 5mpsK
5mpsL
PDB Chain 5mpsL
5mpsM
PDB Chain 5mpsM
5mpsN
PDB Chain 5mpsN
5mpso
PDB Chain 5mpso
5mpsO
PDB Chain 5mpsO
5mpsP
PDB Chain 5mpsP
5mpsR
PDB Chain 5mpsR
5mpsS
PDB Chain 5mpsS
5mpsT
PDB Chain 5mpsT
5mpsX
PDB Chain 5mpsX
5mpsy
PDB Chain 5mpsy
5mpsa00
CATH Domain 5mpsa00
5mpsb00
CATH Domain 5mpsb00
5mpsd00
CATH Domain 5mpsd00
5mpse00
CATH Domain 5mpse00
5mpsf00
CATH Domain 5mpsf00
5mpsg00
CATH Domain 5mpsg00
5mpsh00
CATH Domain 5mpsh00
5mpsj00
CATH Domain 5mpsj00
5mpsJ00
CATH Domain 5mpsJ00
5mpso00
CATH Domain 5mpso00
5mpsR00
CATH Domain 5mpsR00
5mpsT00
CATH Domain 5mpsT00
5mpsy00
CATH Domain 5mpsy00
PDB Prints
PDB Chains (30)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 2 | 08 May, 2017 | Rejected |
| 5 | 08 May, 2017 | Rejected |
| 6 | 08 May, 2017 | Rejected |
| a | 08 May, 2017 | Chopped |
| A | 08 May, 2017 | Holding pen |
| b | 08 May, 2017 | Chopped |
| c | 08 May, 2017 | Domchop allotted |
| C | 08 May, 2017 | Holding pen |
| d | 08 May, 2017 | Chopped |
| e | 08 May, 2017 | Chopped |
| E | 08 May, 2017 | Rejected |
| f | 08 May, 2017 | Chopped |
| g | 08 May, 2017 | Chopped |
| h | 08 May, 2017 | Chopped |
| H | 08 May, 2017 | Holding pen |
| I | 08 May, 2017 | Rejected |
| j | 08 May, 2017 | Chopped |
| J | 08 May, 2017 | Chopped |
| K | 08 May, 2017 | Holding pen |
| L | 08 May, 2017 | Holding pen |
| M | 08 May, 2017 | Holding pen |
| N | 08 May, 2017 | Holding pen |
| o | 08 May, 2017 | Chopped |
| O | 08 May, 2017 | Holding pen |
| P | 08 May, 2017 | Domchop allotted |
| R | 08 May, 2017 | Chopped |
| S | 08 May, 2017 | Holding pen |
| T | 08 May, 2017 | Chopped |
| X | 08 May, 2017 | Domchop allotted |
| y | 08 May, 2017 | Chopped |
CATH Domains (13)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5mpsa00 | 16 May, 2017 | 1.20.940.10 | Assigned |
| 5mpsb00 | 16 May, 2017 | Holding pen | |
| 5mpsd00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpse00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpsf00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpsg00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpsh00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpsj00 | 16 May, 2017 | 2.30.30.100 | Assigned |
| 5mpsJ00 | 14 Dec, 2017 | 2.130.10.10 | Assigned |
| 5mpso00 | 14 Dec, 2017 | Write scan list | |
| 5mpsR00 | 16 May, 2017 | Holding pen | |
| 5mpsT00 | 21 Feb, 2018 | Write scan list | |
| 5mpsy00 | 16 May, 2017 | Holding pen |
UniProtKB Entries (18)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q06217 | SMD2_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D2 |
| P33334 | PRP8_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 8 |
| P53333 | CWC22_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC22 |
| P54999 | RUXF_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein F |
| P36048 | SN114_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SNU114 |
| P43321 | SMD3_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D3 |
| Q03375 | CWC21_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC21 |
| P40968 | PRP17_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 17 |
| Q12309 | CLF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CLF1 |
| Q12417 | PRP46_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor PRP46 |
| Q03654 | CEF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CEF1 |
| P40204 | RUXG_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein G |
| P40018 | RSMB_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein-associated protein B |
| Q12330 | RUXE_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein E |
| Q02260 | SMD1_YEAST | Saccharomyces cerevisiae S288C | Small nuclear ribonucleoprotein Sm D1 |
| Q04048 | SYF1_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor SYF1 |
| Q12046 | CWC2_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor CWC2 |
| P33411 | PRP18_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 18 |
