PDB 5mps

PDB Information

PDB5MPS
MethodELECTRON MICROSCOPY
Host Organismin vitro transcription vector pT7-Fluc(deltai)
Gene SourceSaccharomyces cerevisiae
Primary Citation
Structure of a spliceosome remodelled for exon ligation.
Fica, S.M., Oubridge, C., Galej, W.P., Wilkinson, M.E., Bai, X.C., Newman, A.J., Nagai, K.
Nature
HeaderSplicing
Released2016-12-18
Resolution3.850
CATH Insert Date07 May, 2017

PDB Images (44)

PDB Prints

PDB Chains (30)

Chain ID Date inserted into CATH CATH Status
2 08 May, 2017 Rejected
5 08 May, 2017 Rejected
6 08 May, 2017 Rejected
a 08 May, 2017 Chopped
A 08 May, 2017 Holding pen
b 08 May, 2017 Chopped
c 08 May, 2017 Domchop allotted
C 08 May, 2017 Holding pen
d 08 May, 2017 Chopped
e 08 May, 2017 Chopped
E 08 May, 2017 Rejected
f 08 May, 2017 Chopped
g 08 May, 2017 Chopped
h 08 May, 2017 Chopped
H 08 May, 2017 Holding pen
I 08 May, 2017 Rejected
j 08 May, 2017 Chopped
J 08 May, 2017 Chopped
K 08 May, 2017 Holding pen
L 08 May, 2017 Holding pen
M 08 May, 2017 Holding pen
N 08 May, 2017 Holding pen
o 08 May, 2017 Chopped
O 08 May, 2017 Holding pen
P 08 May, 2017 Domchop allotted
R 08 May, 2017 Chopped
S 08 May, 2017 Holding pen
T 08 May, 2017 Chopped
X 08 May, 2017 Domchop allotted
y 08 May, 2017 Chopped

CATH Domains (13)

Domain ID Date inserted into CATH Superfamily CATH Status
5mpsa00 16 May, 2017 1.20.940.10 Assigned
5mpsb00 16 May, 2017 Holding pen
5mpsd00 16 May, 2017 2.30.30.100 Assigned
5mpse00 16 May, 2017 2.30.30.100 Assigned
5mpsf00 16 May, 2017 2.30.30.100 Assigned
5mpsg00 16 May, 2017 2.30.30.100 Assigned
5mpsh00 16 May, 2017 2.30.30.100 Assigned
5mpsj00 16 May, 2017 2.30.30.100 Assigned
5mpsJ00 14 Dec, 2017 2.130.10.10 Assigned
5mpso00 14 Dec, 2017 Write scan list
5mpsR00 16 May, 2017 Holding pen
5mpsT00 21 Feb, 2018 Write scan list
5mpsy00 16 May, 2017 Holding pen

UniProtKB Entries (18)

Accession Gene ID Taxon Description
Q06217 SMD2_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D2
P33334 PRP8_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor 8
P53333 CWC22_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor CWC22
P54999 RUXF_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein F
P36048 SN114_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor SNU114
P43321 SMD3_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D3
Q03375 CWC21_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor CWC21
P40968 PRP17_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-processing factor 17
Q12309 CLF1_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor CLF1
Q12417 PRP46_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor PRP46
Q03654 CEF1_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor CEF1
P40204 RUXG_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein G
P40018 RSMB_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein-associated protein B
Q12330 RUXE_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein E
Q02260 SMD1_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D1
Q04048 SYF1_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor SYF1
Q12046 CWC2_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor CWC2
P33411 PRP18_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor 18