PDB 5m3l
PDB Information
| PDB | 5M3L |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin.
IUCrJ
|
| Header | Oxygen Transport |
| Released | 2016-10-15 |
| Resolution | 3.800 |
| CATH Insert Date | 14 Nov, 2017 |
PDB Images (34)
5m3l
PDB 5m3l
5m3lA
PDB Chain 5m3lA
5m3lB
PDB Chain 5m3lB
5m3lC
PDB Chain 5m3lC
5m3lD
PDB Chain 5m3lD
5m3lE
PDB Chain 5m3lE
5m3lF
PDB Chain 5m3lF
5m3lG
PDB Chain 5m3lG
5m3lH
PDB Chain 5m3lH
5m3lI
PDB Chain 5m3lI
5m3lJ
PDB Chain 5m3lJ
5m3lK
PDB Chain 5m3lK
5m3lL
PDB Chain 5m3lL
5m3lM
PDB Chain 5m3lM
5m3lN
PDB Chain 5m3lN
5m3lO
PDB Chain 5m3lO
5m3lA00
CATH Domain 5m3lA00
5m3lB00
CATH Domain 5m3lB00
5m3lC00
CATH Domain 5m3lC00
5m3lD00
CATH Domain 5m3lD00
5m3lE00
CATH Domain 5m3lE00
5m3lF00
CATH Domain 5m3lF00
5m3lG00
CATH Domain 5m3lG00
5m3lH00
CATH Domain 5m3lH00
5m3lI00
CATH Domain 5m3lI00
5m3lJ00
CATH Domain 5m3lJ00
5m3lK00
CATH Domain 5m3lK00
5m3lL00
CATH Domain 5m3lL00
5m3lM01
CATH Domain 5m3lM01
5m3lM02
CATH Domain 5m3lM02
5m3lN01
CATH Domain 5m3lN01
5m3lN02
CATH Domain 5m3lN02
5m3lO01
CATH Domain 5m3lO01
5m3lO02
CATH Domain 5m3lO02
PDB Prints
PDB Chains (15)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 14 Nov, 2017 | Chopped |
| B | 14 Nov, 2017 | Chopped |
| C | 14 Nov, 2017 | Chopped |
| D | 14 Nov, 2017 | Chopped |
| E | 14 Nov, 2017 | Chopped |
| F | 14 Nov, 2017 | Chopped |
| G | 14 Nov, 2017 | Chopped |
| H | 14 Nov, 2017 | Chopped |
| I | 14 Nov, 2017 | Chopped |
| J | 14 Nov, 2017 | Chopped |
| K | 14 Nov, 2017 | Chopped |
| L | 14 Nov, 2017 | Chopped |
| M | 14 Nov, 2017 | Chopped |
| N | 14 Nov, 2017 | Chopped |
| O | 14 Nov, 2017 | Chopped |
CATH Domains (18)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5m3lA00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lB00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lC00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lD00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lE00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lF00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lG00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lH00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lI00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lJ00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lK00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lL00 | 10 Dec, 2017 | 1.10.490.10 | Assigned |
| 5m3lM01 | 10 Dec, 2017 | 6.10.250.1520 | Assigned |
| 5m3lM02 | 10 Dec, 2017 | 2.40.128.620 | Assigned |
| 5m3lN01 | 10 Dec, 2017 | 6.10.250.1530 | Assigned |
| 5m3lN02 | 10 Dec, 2017 | 2.40.128.620 | Assigned |
| 5m3lO01 | 10 Dec, 2017 | 6.10.250.1540 | Assigned |
| 5m3lO02 | 10 Dec, 2017 | 2.40.128.620 | Assigned |
UniProtKB Entries (15)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P13579 | GLB4_LUMTE | Lumbricus terrestris | Extracellular globin-4 |
| Q2I743 | Q2I743_LUMTE | Lumbricus terrestris | Extracellular hemoglobin linker L2 subunit |
| O61233 | O61233_LUMTE | Lumbricus terrestris | Extracellular globin |
| Q2I742 | Q2I742_LUMTE | Lumbricus terrestris | Extracellular hemoglobin linker L3 subunit |
| Q9GV76 | Q9GV76_LUMTE | Lumbricus terrestris | Hemoglobin linker chain L1 |
| O61233 | O61233_LUMTE | Lumbricus terrestris | Extracellular globin |
| P02218 | GLB2_LUMTE | Lumbricus terrestris | Extracellular globin-2 |
| P13579 | GLB4_LUMTE | Lumbricus terrestris | Extracellular globin-4 |
| P02218 | GLB2_LUMTE | Lumbricus terrestris | Extracellular globin-2 |
| P11069 | GLB3_LUMTE | Lumbricus terrestris | Extracellular globin-3 |
| O61233 | O61233_LUMTE | Lumbricus terrestris | Extracellular globin |
| P11069 | GLB3_LUMTE | Lumbricus terrestris | Extracellular globin-3 |
| P13579 | GLB4_LUMTE | Lumbricus terrestris | Extracellular globin-4 |
| P11069 | GLB3_LUMTE | Lumbricus terrestris | Extracellular globin-3 |
| P02218 | GLB2_LUMTE | Lumbricus terrestris | Extracellular globin-2 |
