PDB 5gag

PDB Links
Overview

PDB Information

PDB	5GAG
Method	ELECTRON MICROSCOPY
Host Organism	Escherichia coli
Gene Source	Escherichia coli
Primary Citation	Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon. Jomaa, A., Boehringer, D., Leibundgut, M., Ban, N. Nat Commun
Header	Ribosome
Released	2015-11-26
Resolution	3.800
CATH Insert Date	10 Apr, 2016

PDB Images (69)

5gag

PDB 5gag

5gag1

PDB Chain 5gag1

5gag2

PDB Chain 5gag2

5gaga

PDB Chain 5gaga

5gagA

PDB Chain 5gagA

5gagb

PDB Chain 5gagb

5gagB

PDB Chain 5gagB

5gagc

PDB Chain 5gagc

5gagC

PDB Chain 5gagC

5gagd

PDB Chain 5gagd

5gagD

PDB Chain 5gagD

5gage

PDB Chain 5gage

5gagE

PDB Chain 5gagE

5gagf

PDB Chain 5gagf

5gagF

PDB Chain 5gagF

5gagG

PDB Chain 5gagG

5gagH

PDB Chain 5gagH

5gagi

PDB Chain 5gagi

5gagI

PDB Chain 5gagI

5gagJ

PDB Chain 5gagJ

5gagk

PDB Chain 5gagk

5gagK

PDB Chain 5gagK

5gagL

PDB Chain 5gagL

5gagM

PDB Chain 5gagM

5gagN

PDB Chain 5gagN

5gagO

PDB Chain 5gagO

5gagP

PDB Chain 5gagP

5gagQ

PDB Chain 5gagQ

5gagR

PDB Chain 5gagR

5gagS

PDB Chain 5gagS

5gagT

PDB Chain 5gagT

5gagU

PDB Chain 5gagU

5gagV

PDB Chain 5gagV

5gagW

PDB Chain 5gagW

5gagX

PDB Chain 5gagX

5gagY

PDB Chain 5gagY

5gagZ

PDB Chain 5gagZ

5gaga00

CATH Domain 5gaga00

5gagb00

CATH Domain 5gagb00

5gagc00

CATH Domain 5gagc00

5gagC01

CATH Domain 5gagC01

5gagC02

CATH Domain 5gagC02

5gagC03

CATH Domain 5gagC03

5gagd00

CATH Domain 5gagd00

5gagD00

CATH Domain 5gagD00

5gage00

CATH Domain 5gage00

5gagE00

CATH Domain 5gagE00

5gagF00

CATH Domain 5gagF00

5gagG01

CATH Domain 5gagG01

5gagG02

CATH Domain 5gagG02

5gagi00

CATH Domain 5gagi00

5gagI00

CATH Domain 5gagI00

5gagJ01

CATH Domain 5gagJ01

5gagJ02

CATH Domain 5gagJ02

5gagK00

CATH Domain 5gagK00

5gagL00

CATH Domain 5gagL00

5gagM00

CATH Domain 5gagM00

5gagN01

CATH Domain 5gagN01

5gagO01

CATH Domain 5gagO01

5gagP00

CATH Domain 5gagP00

5gagQ00

CATH Domain 5gagQ00

5gagS00

CATH Domain 5gagS00

5gagT00

CATH Domain 5gagT00

5gagU00

CATH Domain 5gagU00

5gagV00

CATH Domain 5gagV00

5gagW00

CATH Domain 5gagW00

5gagX01

CATH Domain 5gagX01

5gagY00

CATH Domain 5gagY00

5gagZ00

CATH Domain 5gagZ00

PDB Prints

PDB Chains (36)

Chain ID	Date inserted into CATH	CATH Status
1	11 Apr, 2016	Rejected
2	11 Apr, 2016	Rejected
a	11 Apr, 2016	Chopped
A	11 Apr, 2016	Rejected
b	11 Apr, 2016	Chopped
B	11 Apr, 2016	Rejected
c	11 Apr, 2016	Chopped
C	11 Apr, 2016	Chopped
d	11 Apr, 2016	Chopped
D	11 Apr, 2016	Chopped
e	11 Apr, 2016	Chopped
E	11 Apr, 2016	Chopped
f	11 Apr, 2016	Rejected
F	11 Apr, 2016	Chopped
G	11 Apr, 2016	Chopped
H	11 Apr, 2016	Holding pen
i	11 Apr, 2016	Chopped
I	11 Apr, 2016	Chopped
J	11 Apr, 2016	Chopped
k	11 Apr, 2016	Rejected
K	11 Apr, 2016	Chopped
L	11 Apr, 2016	Chopped
M	11 Apr, 2016	Chopped
N	11 Apr, 2016	Chopped
O	11 Apr, 2016	Chopped
P	11 Apr, 2016	Chopped
Q	11 Apr, 2016	Chopped
R	11 Apr, 2016	Holding pen
S	11 Apr, 2016	Chopped
T	11 Apr, 2016	Chopped
U	11 Apr, 2016	Chopped
V	11 Apr, 2016	Chopped
W	11 Apr, 2016	Chopped
X	11 Apr, 2016	Chopped
Y	11 Apr, 2016	Chopped
Z	11 Apr, 2016	Chopped

CATH Domains (32)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5gaga00	12 May, 2016	3.30.1390.20	Assigned
5gagb00	12 May, 2016		Holding pen
5gagc00	12 May, 2016	2.20.28.120	Assigned
5gagC01	11 May, 2017	2.40.50.140	Assigned
5gagC02	11 May, 2017		Holding pen
5gagC03	11 May, 2017	4.10.950.10	Assigned
5gagd00	12 May, 2016	1.10.287.3980	Assigned
5gagD00	12 May, 2016		Holding pen
5gage00	12 May, 2016		Holding pen
5gagE00	12 May, 2016		Holding pen
5gagF00	12 May, 2016	3.30.1440.10	Assigned
5gagG01	12 May, 2016	3.90.930.12	Assigned
5gagG02	12 May, 2016	3.90.930.12	Assigned
5gagi00	29 Nov, 2016	1.10.260.30	Assigned
5gagI00	12 May, 2016	3.30.70.1730	Assigned
5gagJ01	12 May, 2016	3.30.1550.10	Assigned
5gagJ02	12 May, 2016	1.10.10.250	Assigned
5gagK00	07 Dec, 2017		Holding pen
5gagL00	12 May, 2016	2.40.150.20	Assigned
5gagM00	12 May, 2016		Holding pen
5gagN01	12 May, 2016	3.90.1170.10	Assigned
5gagO01	12 May, 2016	3.90.1030.10	Assigned
5gagP00	12 May, 2016	3.30.420.100	Assigned
5gagQ00	12 May, 2016		Holding pen
5gagS00	12 May, 2016		Holding pen
5gagT00	12 May, 2016	3.90.470.10	Assigned
5gagU00	12 May, 2016	3.30.70.330	Assigned
5gagV00	12 May, 2016		Write scan list
5gagW00	12 May, 2016	2.40.240.10	Assigned
5gagX01	12 May, 2016		Holding pen
5gagY00	12 May, 2016		Holding pen
5gagZ00	12 May, 2016		Holding pen

UniProtKB Entries (29)

Accession	Gene ID	Taxon	Description
P0A7L8	RL27_ECOLI	Escherichia coli K-12	50S ribosomal protein L27
P0C018	RL18_ECOLI	Escherichia coli K-12	50S ribosomal protein L18
P00634	PPB_ECOLI	Escherichia coli K-12	Alkaline phosphatase
P0A7M6	RL29_ECOLI	Escherichia coli K-12	50S ribosomal protein L29
P0AG55	RL6_ECOLI	Escherichia coli K-12	50S ribosomal protein L6
P0A7K6	RL19_ECOLI	Escherichia coli K-12	50S ribosomal protein L19
P60422	RL2_ECOLI	Escherichia coli K-12	50S ribosomal protein L2
P62399	RL5_ECOLI	Escherichia coli K-12	50S ribosomal protein L5
P0ADY7	RL16_ECOLI	Escherichia coli K-12	50S ribosomal protein L16
P60438	RL3_ECOLI	Escherichia coli K-12	50S ribosomal protein L3
P0AA10	RL13_ECOLI	Escherichia coli K-12	50S ribosomal protein L13
P61175	RL22_ECOLI	Escherichia coli K-12	50S ribosomal protein L22
P0ADY3	RL14_ECOLI	Escherichia coli K-12	50S ribosomal protein L14
P68919	RL25_ECOLI	Escherichia coli K-12	50S ribosomal protein L25
P0A7M2	RL28_ECOLI	Escherichia coli K-12	50S ribosomal protein L28
P0AGD7	SRP54_ECOLI	Escherichia coli K-12	Signal recognition particle protein
P0A7L3	RL20_ECOLI	Escherichia coli K-12	50S ribosomal protein L20
P0A7Q1	RL35_ECOLI	Escherichia coli K-12	50S ribosomal protein L35
P0A7R1	RL9_ECOLI	Escherichia coli K-12	50S ribosomal protein L9
P0A7J3	RL10_ECOLI	Escherichia coli K-12	50S ribosomal protein L10
P0A7P5	RL34_ECOLI	Escherichia coli K-12	50S ribosomal protein L34
P60723	RL4_ECOLI	Escherichia coli K-12	50S ribosomal protein L4
P0AG51	RL30_ECOLI	Escherichia coli K-12	50S ribosomal protein L30
P0A7N9	RL33_ECOLI	Escherichia coli K-12	50S ribosomal protein L33
P0ADZ0	RL23_ECOLI	Escherichia coli K-12	50S ribosomal protein L23
P02413	RL15_ECOLI	Escherichia coli K-12	50S ribosomal protein L15
P0A7J7	RL11_ECOLI	Escherichia coli K-12	50S ribosomal protein L11
P0AG44	RL17_ECOLI	Escherichia coli K-12	50S ribosomal protein L17
P60624	RL24_ECOLI	Escherichia coli K-12	50S ribosomal protein L24