PDB 5ec5

PDB Information

PDB5EC5
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli 'BL21-Gold(DE3)pLysS AG'
Gene SourceEisenia fetida
Primary Citation
Crystal structure of an invertebrate cytolysin pore reveals unique properties and mechanism of assembly.
Podobnik, M., Savory, P., Rojko, N., Kisovec, M., Wood, N., Hambley, R., Pugh, J., Wallace, E.J., McNeill, L., Bruce, M., Liko, I., Allison, T.M., Mehmood, S., Yilmaz, N., Kobayashi, T., Gilbert, R.J., Robinson, C.V., Jayasinghe, L., Anderluh, G.
Nat Commun
HeaderToxin
Released2015-10-20
Resolution3.100
CATH Insert Date29 May, 2016

PDB Images (55)

PDB Prints

PDB Chains (18)

Chain ID Date inserted into CATH CATH Status
A 30 May, 2016 Chopped
B 30 May, 2016 Chopped
C 30 May, 2016 Chopped
D 30 May, 2016 Chopped
E 30 May, 2016 Chopped
F 30 May, 2016 Chopped
G 30 May, 2016 Chopped
H 30 May, 2016 Chopped
I 30 May, 2016 Chopped
J 30 May, 2016 Chopped
K 30 May, 2016 Chopped
L 30 May, 2016 Chopped
M 30 May, 2016 Chopped
N 30 May, 2016 Chopped
O 30 May, 2016 Chopped
P 30 May, 2016 Chopped
R 30 May, 2016 Chopped
S 30 May, 2016 Chopped

CATH Domains (36)

Domain ID Date inserted into CATH Superfamily CATH Status
5ec5A01 25 Oct, 2016 Holding pen
5ec5A02 25 Oct, 2016 2.80.10.50 Assigned
5ec5B01 25 Oct, 2016 Holding pen
5ec5B02 25 Oct, 2016 2.80.10.50 Assigned
5ec5C01 25 Oct, 2016 Holding pen
5ec5C02 25 Oct, 2016 2.80.10.50 Assigned
5ec5D01 25 Oct, 2016 Holding pen
5ec5D02 25 Oct, 2016 2.80.10.50 Assigned
5ec5E01 25 Oct, 2016 Holding pen
5ec5E02 25 Oct, 2016 2.80.10.50 Assigned
5ec5F01 25 Oct, 2016 Holding pen
5ec5F02 25 Oct, 2016 2.80.10.50 Assigned
5ec5G01 25 Oct, 2016 Holding pen
5ec5G02 25 Oct, 2016 2.80.10.50 Assigned
5ec5H01 25 Oct, 2016 Write scan list
5ec5H02 25 Oct, 2016 2.80.10.50 Assigned
5ec5I01 25 Oct, 2016 Holding pen
5ec5I02 25 Oct, 2016 2.80.10.50 Assigned
5ec5J01 25 Oct, 2016 Holding pen
5ec5J02 25 Oct, 2016 2.80.10.50 Assigned
5ec5K01 25 Oct, 2016 Holding pen
5ec5K02 25 Oct, 2016 2.80.10.50 Assigned
5ec5L01 25 Oct, 2016 Holding pen
5ec5L02 25 Oct, 2016 2.80.10.50 Assigned
5ec5M01 25 Oct, 2016 Holding pen
5ec5M02 25 Oct, 2016 2.80.10.50 Assigned
5ec5N01 25 Oct, 2016 Holding pen
5ec5N02 25 Oct, 2016 2.80.10.50 Assigned
5ec5O01 25 Oct, 2016 Holding pen
5ec5O02 25 Oct, 2016 2.80.10.50 Assigned
5ec5P01 25 Oct, 2016 Holding pen
5ec5P02 25 Oct, 2016 2.80.10.50 Assigned
5ec5R01 25 Oct, 2016 Holding pen
5ec5R02 25 Oct, 2016 2.80.10.50 Assigned
5ec5S01 25 Oct, 2016 Holding pen
5ec5S02 25 Oct, 2016 2.80.10.50 Assigned

UniProtKB Entries (18)

Accession Gene ID Taxon Description
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin
O18423 TXL_EISFE Eisenia fetida Lysenin