PDB 4jya

PDB Information

PDB4JYA
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Unusual base pairing during the decoding of a stop codon by the ribosome.
Fernandez, I.S., Ng, C.L., Kelley, A.C., Wu, G., Yu, Y.T., Ramakrishnan, V.
Nature
HeaderRibosome
Released2013-03-29
Resolution3.100
CATH Insert Date04 Aug, 2013

PDB Images (49)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 05 Aug, 2013 Rejected
B 05 Aug, 2013 Chopped
C 05 Aug, 2013 Chopped
D 05 Aug, 2013 Chopped
E 05 Aug, 2013 Chopped
F 05 Aug, 2013 Chopped
G 05 Aug, 2013 Chopped
H 05 Aug, 2013 Chopped
I 05 Aug, 2013 Chopped
J 05 Aug, 2013 Chopped
K 05 Aug, 2013 Chopped
L 05 Aug, 2013 Chopped
M 05 Aug, 2013 Chopped
N 05 Aug, 2013 Chopped
O 05 Aug, 2013 Chopped
P 05 Aug, 2013 Chopped
Q 05 Aug, 2013 Chopped
R 05 Aug, 2013 Chopped
S 05 Aug, 2013 Chopped
T 05 Aug, 2013 Chopped
U 05 Aug, 2013 Rejected
X 05 Aug, 2013 Rejected
Y 05 Aug, 2013 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
4jyaB01 14 Aug, 2013 3.40.50.10490 Assigned
4jyaB02 14 Aug, 2013 1.10.287.610 Assigned
4jyaC01 14 Aug, 2013 3.30.300.20 Assigned
4jyaC02 14 Aug, 2013 3.30.1140.32 Assigned
4jyaD01 14 Aug, 2013 1.10.1050.10 Assigned
4jyaD02 14 Aug, 2013 3.10.290.10 Assigned
4jyaE01 14 Aug, 2013 3.30.160.20 Assigned
4jyaE02 14 Aug, 2013 3.30.230.10 Assigned
4jyaF00 14 Aug, 2013 3.30.70.60 Assigned
4jyaG00 14 Aug, 2013 1.10.455.10 Assigned
4jyaH01 14 Aug, 2013 3.30.1370.30 Assigned
4jyaH02 14 Aug, 2013 3.30.1490.10 Assigned
4jyaI00 14 Aug, 2013 3.30.230.10 Assigned
4jyaJ00 14 Aug, 2013 3.30.70.600 Assigned
4jyaK00 14 Aug, 2013 3.30.420.80 Assigned
4jyaL00 14 Aug, 2013 2.40.50.140 Assigned
4jyaM01 14 Aug, 2013 1.10.8.50 Assigned
4jyaM02 14 Aug, 2013 4.10.910.10 Assigned
4jyaN00 14 Aug, 2013 4.10.830.10 Assigned
4jyaO00 14 Aug, 2013 1.10.287.10 Assigned
4jyaP00 14 Aug, 2013 3.30.1320.10 Assigned
4jyaQ00 14 Aug, 2013 2.40.50.140 Assigned
4jyaR00 14 Aug, 2013 4.10.640.10 Assigned
4jyaS00 14 Aug, 2013 3.30.860.10 Assigned
4jyaT00 14 Aug, 2013 1.20.58.110 Assigned

UniProtKB Entries (19)

Accession Gene ID Taxon Description
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
A0A0N0BLP2 RS14Z_THEAQ Thermus aquaticus 30S ribosomal protein S14 type Z
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
A0A0N0BLS5 RS17_THEAQ Thermus aquaticus 30S ribosomal protein S17
P0DOY9 RS8_THET8 Thermus thermophilus HB8 30S ribosomal protein S8
Q5SJ76 RS15_THET8 Thermus thermophilus HB8 30S ribosomal protein S15
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
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